Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2343 ATGGACGAGGTGGTTCTGTTGGATACATGGGGCAGCCCGTTTGGGATGAGGGCTTGGATTGCATTGGAAGAAAAGGGTGTTAAGTATGAACGGAAGGAAGAGGATCTGAGCAACAAGAGCCCTTTGCTTCTGCAGACGAACCCTATTCACAAGAAAGTTCCAGTTCTCATTCATAATGGAAAACCCATTTGTGAATCTGCAATAATAGTGCAGTACATCGATGAGGTCTGGAATCAGAACCCTCCACTCATCCCTTCTGATCCTTATGAGAGAGCTCAAGCCAGATTCTGGGTCGATTACATTGATGCAAAGGTGTATCCTACTTGGGAGAAAATGTGGCTTTCTAAAGGAGAAGAACATGAGGCAGGAAAAAGAGAGTTGATTTCTATCTTTAAGCAGCTGGAAGAGACATTGGGTGACAAACCTTTTTATGGAAATGAGAGGTTTGGCTTTGTTGATATTGTTCTAATCCCTTTCTACAGTTGGTTTTATACTTTTGAGACATATGGGAACTTTCAAATGGAAGCACAATGTCCTAAACTTGTGGCTTGGGCTAAAAGATGCATGCAGAGAAACACTGTCTCCACCATTCTTCCTAATCAGAAGCAACTTTACATTGCAGTTGTGGAAATGGAGAAGAATTTACAAACTTAA 654 0.4174 MDEVVLLDTWGSPFGMRAWIALEEKGVKYERKEEDLSNKSPLLLQTNPIHKKVPVLIHNGKPICESAIIVQYIDEVWNQNPPLIPSDPYERAQARFWVDYIDAKVYPTWEKMWLSKGEEHEAGKRELISIFKQLEETLGDKPFYGNERFGFVDIVLIPFYSWFYTFETYGNFQMEAQCPKLVAWAKRCMQRNTVSTILPNQKQLYIAVVEMEKNLQT* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2343 217 CDD GST_N_Tau 4 77 - -
Vra5g2343 217 Gene3D Glutaredoxin 1 86 - -
Vra5g2343 217 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 3 211 - -
Vra5g2343 217 Gene3D - 87 217 - -
Vra5g2343 217 Pfam Glutathione S-transferase, C-terminal domain 121 187 - -
Vra5g2343 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vra5g2343 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 206 IPR010987 -
Vra5g2343 217 SFLD Main (cytGST) 1 215 - -
Vra5g2343 217 CDD GST_C_Tau 88 211 IPR045074 GO:0004364|GO:0006749
Vra5g2343 217 SFLD Main.3: Omega- and Tau-like 1 215 IPR045073 -
Vra5g2343 217 SUPERFAMILY GST C-terminal domain-like 75 205 IPR036282 -
Vra5g2343 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 211 IPR045073 -
Vra5g2343 217 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Vra5g2343 217 Pfam Glutathione S-transferase, N-terminal domain 5 75 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2343 Vra-Chr5 30241874 30242788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2343 2 215 Glutathione S-transferase Gene Family AT1G17180 59.346 7.10e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2343 K00799 - gmx:100500477 364.385