Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2295 ATGACCGAAGAGGACAAGCCCGTAGCCTCCATCGTCGGCCACCAGCACCACCACCATCACCACCACCCTCCGCCGCAGCCACTACCCGCTCCACCACCACAGTATGGCACCTTCCAAGGCGTCGCCAACTACCCTCCTCCGCCCGAGCCACATCCCGCTATTGGCTTTCCCCAACCCGTTCCACCGGCCGGCGCCGTCAACGCTGGTCCTCTTCCACCGTACTACCCGGGATACCAAGCTGTACCCGGTTACGCAGTTGCTGAAGGAAGACCTGTAAGAGAACGGCGCCTTGGTTGCTGTGGCCTTGGTTGTGGCTGGTGTCTGTTTATACTAGGCTTCTTTCTTGCTGCCATCCCATGGTACGTTGGGGCAATAATTATGCTGTGTTCCAGAGTAGACCATCGAGAGAAACCTGGATATGTTGCTTGTGTAGTTGCTGCTGTTCTGGGTACAATTGCGATTATTCTTGGTGTTGCAAAGGGAGCAGATGACTGGTAA 498 0.5622 MTEEDKPVASIVGHQHHHHHHHPPPQPLPAPPPQYGTFQGVANYPPPPEPHPAIGFPQPVPPAGAVNAGPLPPYYPGYQAVPGYAVAEGRPVRERRLGCCGLGCGWCLFILGFFLAAIPWYVGAIIMLCSRVDHREKPGYVACVVAAVLGTIAIILGVAKGADDW* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2295 165 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 165 IPR044804 -
Vra5g2295 165 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2295 Vra-Chr5 29500497 29503526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2295 1 165 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 34.842 2.10e-26 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2295 - - gmx:100810998 218.779