Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2294 ATGGTGTTGTTAACTTTGAGAAGTGCAACATGGTTCCTGATATTGGTGCCTGTGGTGGTGCTATGGTTGTGGAAACTAGTGAACTGGGTGTGGCTGAGGCCAAAGAGAATGGAGAAGATTCTGAGAGCACAGGGCCTTCAGGGAAACCCTTACAGGCTCTTGATTGGAGACACAAGGGAAATGTTTACAGTGCTCGTGCAAGCTGCAAAATCTCAGAAATCCACCAGTTTTCTCTCCACTGACAACGATGTTGCACCTCATATCACAACCTTTAACCATCACATTGTACACAAATTTGGCAAAAAATCATTTACATGGGAAGGTCCCACACCAAAAGTTATTATCATGGATCCTGAGCAAATCAAAGACATCTTCAACAAGTTCCAAGATTTTGAGAAGCCTAAGTTGAGCCCCCTTTTCAAATTGTTGGGTACTGGACTTGCAAATTTAGAAGGAGAGAAATGGAAGATGCATCGAAAGATTATAAACCCTGCTTTCCATTTAGAAAAACTGAAGGTTATGTTACCAACATTTATGCAATGTTGCGATGACATGATTTCCAAATGGGAAGTGATGCTGTCTTCACAGGAGAAATGTGAAATTGACGTATGGCCTTTCCTTCAAAAACTGACCCGTGATATTATTTCTAGAACAGCATTTGGAAGCAGTTACGAAGAAGGTAGAGAAATATTTGAACTTCTGAAAGAGCAAACAGGACTTGTTATGAGATCACGGAAAGTTTACATTCCAGGGTCATGGTTGTTACCAACAGCTAGAAATAGGAGGATGAAAGCAATTGATGCTCATATACGAAGATTACTTAAAGACATCATTAACAATCGAGAGAAAGCAATGAAGGGCGGTGATGTTAACAGCCATGACTTATTGGGGATACTTTTGGAATCAAACCATGCGGAAATGATAGAAAATAGAAACAGTAAAACCCTTCCAATGACTAGTCAAGATGTAATTGAGGAGTGCAATGCATTCTACATAGCAGGGCAAGAAACTTCAGCAGTTTTGCTGGTTTGGACAATGTTGTTGTTGAGTAGGCATCCTGAGTGGCAAGCACGTGCTAGAGAGGAAGTGTTGAATGCTTTTGGTAACCAAAAGCCAGACTATAATGGATTAAGTCACCTCAAAGTTGTGACCATGATTTTGTACGAGGTTTTGAGGTTATATCCACCTGTAGTTTATTTCAGTCGAGGTATCAAGAAAGATGTGAAACTTGGAGACCTTTGTCTACCTGGAGGAGTGCAAATTTCCATACCAATATTGTTGGTTCACCAGGATCGTGATATTTGGGGTGATGATGTTGCTGAGTTCAAACCAGAAAGATTTGCTGAAGGAGTGGCAACTGCAACAAAAGGCCAAGTTTCATTTTTCCCATTTGGATGGGGTCCTAGAGTATGCATTGGCCAAAATTTTGCTCTATTAGAAGCAAAGCTGGTTTTGTCCTTACTTTTGCAACGTTTCTCGTTTGAGATTTCTCCAGCCTACGCACATGCTCCAGTCACTTTGTTCACTCTTCATCCAAAACATGGGGCTCATGTCATCTTACACAAGCTCTAG 1572 0.409 MVLLTLRSATWFLILVPVVVLWLWKLVNWVWLRPKRMEKILRAQGLQGNPYRLLIGDTREMFTVLVQAAKSQKSTSFLSTDNDVAPHITTFNHHIVHKFGKKSFTWEGPTPKVIIMDPEQIKDIFNKFQDFEKPKLSPLFKLLGTGLANLEGEKWKMHRKIINPAFHLEKLKVMLPTFMQCCDDMISKWEVMLSSQEKCEIDVWPFLQKLTRDIISRTAFGSSYEEGREIFELLKEQTGLVMRSRKVYIPGSWLLPTARNRRMKAIDAHIRRLLKDIINNREKAMKGGDVNSHDLLGILLESNHAEMIENRNSKTLPMTSQDVIEECNAFYIAGQETSAVLLVWTMLLLSRHPEWQARAREEVLNAFGNQKPDYNGLSHLKVVTMILYEVLRLYPPVVYFSRGIKKDVKLGDLCLPGGVQISIPILLVHQDRDIWGDDVAEFKPERFAEGVATATKGQVSFFPFGWGPRVCIGQNFALLEAKLVLSLLLQRFSFEISPAYAHAPVTLFTLHPKHGAHVILHKL* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2294 523 Pfam Cytochrome P450 95 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2294 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Vra5g2294 523 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2294 523 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2294 523 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2294 523 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2294 523 Gene3D Cytochrome P450 29 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2294 523 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 14 519 - -
Vra5g2294 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 519 - -
Vra5g2294 523 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2294 523 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2294 523 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2294 523 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2294 523 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2294 523 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2294 523 SUPERFAMILY Cytochrome P450 87 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2294 Vra-Chr5 29492112 29496215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2294 14 523 Cytochrome P450 AT3G14690 53.711 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2294 - K17873 gmx:100781923 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2294 5 29492112 29496215 Vra5g2294 5 29492112 29496215 ECH