Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2291 ATGGAAGCAGCATGGGCAACAACTGTGACTATCATAGTGATACTTGTTCTGATATGGGCATGGAAGATTTTGAACTGGTTATGGTTCAAACCAAAGAGGCTTGAAAAACTGCTAAGAGAGCAAGGCTTTCAAGGCAATCCGTACAAGCTTTTTGTTGGAGACAGCAAGGAGTTTCTCAAAATGAGAAAGGAAGCCTTGTCCAAACCCATGAATCTCTGTGATGACATAGCGCCACGTGTTTCTTCCTACATGCATCATATTGTCAACACACATGGTATTTTTCGATTCTTTTCTTGCAGTTTTCATCTAACCACTTCAGTTTTGCTGGTTTGGACAATGGTGTTATTGAGTAGGTACCCTAATTGGCAACAACGTGCAAGGGAGGAAGTCTTCCAAGTCTTTGGAAATCAAAAGCCAGGTTTTGATGGTTTAAATCGCCTAAAGATTGTCAGTATGATTTTGAATGAGGTTCTTAGATTATACCCACCGGTACTTGGGTTGACACGATTTGTTAAAAGAGATATGAAACTTGGAAGCATAACATTGCCTGCTGGAGTGCAGGTTTTACTTCCGACAATTTTGGTTCACCATGGATGTGAATTCTGGGGTGAAGATGCTAAGCAGTTCAATCCTGAGAGATTTTCTGAAGGAGTTCTAAAGGCAACAAATGGTAGAGTTTCATTTTTCCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTCTCCTTTTTGGAAGCAAAGATGGCTTTGTCAATGATTTTACAACATTTCTCATTTGAACTTTCTCCAGCATATGCTCATGCTCCAGCTATGTTACTCACTCTTCATCCACAGTATGGTGCTCATATCATTCTCCATAGAGTGAAATCTTAA 879 0.4005 MEAAWATTVTIIVILVLIWAWKILNWLWFKPKRLEKLLREQGFQGNPYKLFVGDSKEFLKMRKEALSKPMNLCDDIAPRVSSYMHHIVNTHGIFRFFSCSFHLTTSVLLVWTMVLLSRYPNWQQRAREEVFQVFGNQKPGFDGLNRLKIVSMILNEVLRLYPPVLGLTRFVKRDMKLGSITLPAGVQVLLPTILVHHGCEFWGEDAKQFNPERFSEGVLKATNGRVSFFPFGWGPRICIGQNFSFLEAKMALSMILQHFSFELSPAYAHAPAMLLTLHPQYGAHIILHRVKS* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2291 292 PRINTS E-class P450 group I signature 109 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2291 292 PRINTS E-class P450 group I signature 192 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2291 292 PRINTS E-class P450 group I signature 228 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2291 292 PRINTS E-class P450 group I signature 238 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2291 292 PRINTS P450 superfamily signature 100 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2291 292 PRINTS P450 superfamily signature 152 163 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2291 292 PRINTS P450 superfamily signature 229 238 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2291 292 PRINTS P450 superfamily signature 238 249 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2291 292 PANTHER CYTOCHROME P450 FAMILY MEMBER 102 288 - -
Vra5g2291 292 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 93 - -
Vra5g2291 292 Pfam Cytochrome P450 102 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2291 292 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 231 240 IPR017972 GO:0005506|GO:0016705
Vra5g2291 292 PANTHER CYTOCHROME P450 CYP72A219-LIKE 8 93 - -
Vra5g2291 292 PANTHER CYTOCHROME P450 CYP72A219-LIKE 102 288 - -
Vra5g2291 292 Gene3D Cytochrome P450 94 291 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2291 292 SUPERFAMILY Cytochrome P450 102 288 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2291 Vra-Chr5 29434512 29438440 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2291 22 92 Cytochrome P450 AT3G14680 45.070 4.08e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2291 - - vra:106760579 590.112