Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2289 ATGGCTTCATTCAAAAGCAGCAACATTGAAGCTGAAATACCAGAAGAGATTCTGATAGCTGAGATTATGCAACTTCATGCAAGCATCTCAAAGCTTGAATCTCTTAGGCCTTGCAAGCAAGTGAATAGTCTCTTCAGTCATCTTGTGAAACTTTGCACTCTCCCTTCATCGATTGACATTGAGGCCTTGCCTCAAGAGGTGCAAGAGATACGTCAGAATCTGATTAACCTTAGTGGCCATGCCGAGGGACTCTTAGAGCTTGAATTCTCAACCTTCATAAGCCTCACAGCCGAGCCCTTAAAGAATGTGACCCTTTTCCCTTACTATGGCAACTATTTGAAACTAGCACAGATGGAGAACAAAATCCTGAAAGAAAATGGGATTGTGAATGCAAAGAAAGTGGCTTTTGTGGGATCAGGTCCAATGCCACTCACTTCCATCATAATGGCCACTCACCACATGGAGTCCACACAGTTTGACAACTTTGACAATGATGAGAAGGCAAACGAGGTGGCTCGAAAGATTGTTGCTTCCGATGCAGCACTTGAGAAGAGGATGAAGTTTGTGACACAAGACATCATGGACGTGAGAGAGAGATTGGGGCAATATGATTGCATCTTTTTGGCAGCACTCGTTGGCCTGAATAGGGAAGCAAAAGTGAAGATTTTGGGACACATAAGGAAGTATATGAAAGAGGAAGGGGTTTTGCTTGTGAGAAGTGCAAAAGGGTCAAGAGCTTTCTTGTACCCTGTTATTCAGGAACGTGACATGCTGAATTTTCAGGTTCTTTCCATCTTTCACCCCACAAATGATGTCATCAATTCGGTTGTTCTTCTTCGCAAGCCTAAGGCTTAG 855 0.4351 MASFKSSNIEAEIPEEILIAEIMQLHASISKLESLRPCKQVNSLFSHLVKLCTLPSSIDIEALPQEVQEIRQNLINLSGHAEGLLELEFSTFISLTAEPLKNVTLFPYYGNYLKLAQMENKILKENGIVNAKKVAFVGSGPMPLTSIIMATHHMESTQFDNFDNDEKANEVARKIVASDAALEKRMKFVTQDIMDVRERLGQYDCIFLAALVGLNREAKVKILGHIRKYMKEEGVLLVRSAKGSRAFLYPVIQERDMLNFQVLSIFHPTNDVINSVVLLRKPKA* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2289 284 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
Vra5g2289 284 Gene3D Vaccinia Virus protein VP39 16 283 IPR029063 -
Vra5g2289 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
Vra5g2289 284 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Vra5g2289 284 CDD AdoMet_MTases 162 238 - -
Vra5g2289 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Vra5g2289 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 241 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2289 Vra-Chr5 29408832 29409844 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2289 15 281 Nicotianamine Synthase Gene Family AT1G09240 50.923 1.46e-89 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2289 K05953 - gmx:100819726 481.87