Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2285 ATGGTTATGGCCAATAGTGGCATAAACTTGGTGCTTCATCAAGGGGCAATGTTGCCACATGAACTTCCTGTAGCTGCTGTACTGGGACCTTCGTGCTTTCATTCGTTTTCTTCAACTTGGGCTATTACCAATGGAGCCATTCTTGTCTCACCACAAAGGGGGAACTGCAGTGGTACTTGTTATTGCTCAAGTTTCAGGAAATGTACGTGCAAATGGAAACGGCTTGTAAGAAGATGCTCCACAAGTGAGTTTGTCATTGCCAGTGATGAAAACTATGGCAATAAGCAGGTTGTTAGTCTCACTCCCCGTCTCTACGACTATGTACTAAAAAATGTTCGAGAGCCAGAGATTTTAAGGCAATTGCGGCAGGAGACAGCCTCTATGCGTGGAAGTCAAATGCAGGTGTCCCCTGATCAGGCACAGCTGCTTGCAATGCTTGTGCAGATTCTTGGAGCAGAACGGTGTATTGAGGTTGGCGTTTATACAGGATACTCATCCTTAGCCATAGCATTAGTTCTGCCAGATTCAGGTCATTTAGTTGCCTGTGAAAGAGATCCCAAATCTCTTGAAGTTGCCAAGAAGTATTATCATCTAGCTGGTGTTTCACATAAGGTGGATGTAAAACTTGGACTCGCAATGGACTCCCTAGAATCATTAATTCTGAATGGTGAAGCAGGAAGCTATGATTTTGCATTTATTGATGCGGAGAAAAGAATGAATGAGAAATATTTTGAACTGCTACTACAGCTGGTGAAGGTTGGAGGTCTTATTGTAATTGATAATGTCCTTTGGCATGGAAAAGTTGCTGACCAGCTGGTTTATGACCCTAAAACTGTCAGCATTAGAAATTTTAACCAGAAGTTAATGGAAGATGAACGCGTAAACATCAGTATGTGTATTGACACCGATGGAGTTGGTTTCATTCCTAGTGGAATGTTTGCTAAGAAGTTTTTCAACCACTCAGTCACACTATCAATCATCTCAATAGCGACAAACTCAGATTCCATTGTTGATCTTGTAATAATTGTTTGTTCAGATGATTTCCTTGTAATTGTACCACCCCCAAGTGTGAATACATAA 1080 0.4157 MVMANSGINLVLHQGAMLPHELPVAAVLGPSCFHSFSSTWAITNGAILVSPQRGNCSGTCYCSSFRKCTCKWKRLVRRCSTSEFVIASDENYGNKQVVSLTPRLYDYVLKNVREPEILRQLRQETASMRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPDSGHLVACERDPKSLEVAKKYYHLAGVSHKVDVKLGLAMDSLESLILNGEAGSYDFAFIDAEKRMNEKYFELLLQLVKVGGLIVIDNVLWHGKVADQLVYDPKTVSIRNFNQKLMEDERVNISMCIDTDGVGFIPSGMFAKKFFNHSVTLSIISIATNSDSIVDLVIIVCSDDFLVIVPPPSVNT* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2285 359 Pfam O-methyltransferase 112 305 IPR002935 GO:0008171
Vra5g2285 359 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 82 305 - -
Vra5g2285 359 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 94 311 IPR002935 GO:0008171
Vra5g2285 359 Gene3D Vaccinia Virus protein VP39 86 308 IPR029063 -
Vra5g2285 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 304 IPR029063 -
Vra5g2285 359 PANTHER O-METHYLTRANSFERASE-RELATED 82 305 - -
Vra5g2285 359 CDD AdoMet_MTases 154 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2285 Vra-Chr5 29333180 29338251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2285 73 303 Monolignol Biosynthesis Gene Families AT3G62000 73.932 5.27e-124 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2285 - - gmx:100776619 516.924