Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2275 ATGGCTTCGACCCTTTTCTCAAAGATGCTTTCGGGTCATCGATTGATCCACCACTCGTCGTTCCTCACTCAGCAGCCACAGTTTCTCTCTTCCTTATTCAGTAAACGGCTGTTTTGTATACAAACTGTCCCGGTCCCAGTTTCTACATCCCAAAACAGCAAAACAACTTGTTGGGTTCCTTGTATGGCTTCTTCCTCAGTTGGTAGAAGAGCTACATATTCTACAAAATCTGTATCAACAAATGAGCCAGTTGTTTCTGTTGATTGGCTTTATGATAACCTGAAGTTGCCAGATATCAAGGTACTGGATGCTTCATGGTACATGCCAGATGAGCAGAGGAATCCAATTCAAGAATATCAGGTTGCTCACATTCCGGGTGCCCTTTTCTTTGACGTGGATGGAATAGCAGATCGTACTACAAAGTTACCACACATGCTGCCATCTGAGGAAGCTTTTGCTGCTGCTGTTTCTGCCCTTGGCATAGAGAACAAAGATGACTTGGTTGTTTATGATGGAAAAGGGTTATTTAGTGCAGCCCGTGTTTGGTGGATGTTCCGAGTATTTGGGCATGACAGAGTTTGGGTGTTAGATGGTGGCCTGCCAAGATGGCGTGCATCAGGTTATGATGTTGAATCTAGTGCTTCAAGTGATGCTATTCTTAAAGCCAGTGCTGCAAGTGAGGCCATCGAGAAAGTATACAAGGGACAAACAGTTGGCCCACTCACATTCCAGACTAAATTTCGGCCACATCTTGTTTGGAACCTTGATCAGGTAAAGAAAAATATAGAGGACAAAACTCACCAACACATAGATGCTCGATCAAAGCCCAGGTTTGATGGAGCTGTTCCAGAGCCTCGAAAGGGAATCAGAAGTGGTCATGTACCTGGCAGCAAATGCATTCCTTTTGGCCAGCTGTTAGATAGTTCATATACATTGTTACCGGCAAATGAGCTGAAGAAGCGATTTGAACAAGAAGGCATCTCTCTCGATAGCCCTGCTGTTACTTCATGTGGAACAGGCGTAACTGCCTGCATTCTTGCATTGGGTCTGCATCGTCTTGAAAAGTTTGATGTTGCAGTTTATGATGGATCTTGGACTGAATGGGGAGCTCAAGCTGATACACCTGTTGAGGTTTCATAA 1140 0.4447 MASTLFSKMLSGHRLIHHSSFLTQQPQFLSSLFSKRLFCIQTVPVPVSTSQNSKTTCWVPCMASSSVGRRATYSTKSVSTNEPVVSVDWLYDNLKLPDIKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTKLPHMLPSEEAFAAAVSALGIENKDDLVVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYKGQTVGPLTFQTKFRPHLVWNLDQVKKNIEDKTHQHIDARSKPRFDGAVPEPRKGIRSGHVPGSKCIPFGQLLDSSYTLLPANELKKRFEQEGISLDSPAVTSCGTGVTACILALGLHRLEKFDVAVYDGSWTEWGAQADTPVEVS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2275 379 Gene3D - 76 219 IPR036873 -
Vra5g2275 379 SMART rhod_4 85 209 IPR001763 -
Vra5g2275 379 SMART rhod_4 253 374 IPR001763 -
Vra5g2275 379 CDD TST_Repeat_2 254 370 - -
Vra5g2275 379 ProSitePatterns Rhodanese signature 1. 119 130 IPR001307 GO:0004792
Vra5g2275 379 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 248 377 IPR036873 -
Vra5g2275 379 PANTHER THIOSULFATE SULFERTANSFERASE 65 379 IPR045078 GO:0016783
Vra5g2275 379 Pfam Rhodanese-like domain 86 205 IPR001763 -
Vra5g2275 379 Pfam Rhodanese-like domain 256 370 IPR001763 -
Vra5g2275 379 ProSitePatterns Rhodanese C-terminal signature. 358 368 IPR001307 GO:0004792
Vra5g2275 379 PANTHER THIOSULFATE/3-MERCAPTOPYRUVATE SULFURTRANSFERASE 1, MITOCHONDRIAL-LIKE 65 379 - -
Vra5g2275 379 ProSiteProfiles Rhodanese domain profile. 263 377 IPR001763 -
Vra5g2275 379 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 82 214 IPR036873 -
Vra5g2275 379 CDD TST_Repeat_1 84 207 - -
Vra5g2275 379 Gene3D - 249 377 IPR036873 -
Vra5g2275 379 ProSiteProfiles Rhodanese domain profile. 95 212 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2275 62 377 Sulfurtransferasese or Rhodanese AT1G79230 79.430 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2275 K01011 - gmx:100796802 707.983