Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2273 ATGGCGGCGCCGAATAGAATCGAACGCGCTCACCAGATGTACCGTGAAGGACGATACGAGGAGGCGTTAGGGTTCTACACGGAGGCAATCGCCATGGCTAAGACTAACCCTCAGAAGATCGCTTTGCATAGCAATCGAGCCGCGTGCTTTCTGAAGCTTCACGATTTCAAAAAGGCAGCAGAAGAGTGTACCTCGGTGCTTGAGCTTGATCACAAGCACAGTGGGGCATTGATGCTGCGGGCTCAAACGCTTGTCACCCTGAAGGAGTATCATTCAGCTCTTTTTGATGTCAACAGACTGTTAGAGTTGAATCCATCTTCAGAGGTTTATCAAAATCTTCAAGCTCGCTTGAAGACACAGTTGTCACTTGCTCCAATACCAGAATCAGAAGAGGAGTTTGAAGAACAGGAAGACGAGGAGCCTGAAGTGATAATTGAAGAGGAGAATGAAAGAGAAGAGATGGGAGGCAAATATTCTTCGATTTCTAATATTATGACAGAACAGAAGGATGAACTCGGTAAAGGCATTGTTATTACCGAATGTGCTGCTCATGAAGCAGAGCCCAAGTTTTCAATGAAGCAAGGGGGAAACCAAAACTATGACTCTAAGAAGTTCATAGCAGATGCTATAGCTCCTAAAGCACCAAGCAGGGAATCCAATGAGGAAAATTCAAAAGGATGGCAAACTATTCCAAAACCAAAAGGACATTCAGCTCTAGACTACGCACGGTGGGATAGTGTTGAAGATGATTCTAGTGATGATGATGGTGACAGTGAAGAAGAAGAATCTTTGCCTCAATACCGGTTTCGTGTAAGAACAATTGGTGTACGTCCTGTAAAGTGA 843 0.4472 MAAPNRIERAHQMYREGRYEEALGFYTEAIAMAKTNPQKIALHSNRAACFLKLHDFKKAAEECTSVLELDHKHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLQARLKTQLSLAPIPESEEEFEEQEDEEPEVIIEEENEREEMGGKYSSISNIMTEQKDELGKGIVITECAAHEAEPKFSMKQGGNQNYDSKKFIADAIAPKAPSRESNEENSKGWQTIPKPKGHSALDYARWDSVEDDSSDDDGDSEEEESLPQYRFRVRTIGVRPVK* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2273 280 Pfam Anaphase-promoting complex, cyclosome, subunit 3 17 94 - -
Vra5g2273 280 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 280 - -
Vra5g2273 280 MobiDBLite consensus disorder prediction 203 267 - -
Vra5g2273 280 Gene3D Tetratricopeptide repeat domain 2 150 IPR011990 GO:0005515
Vra5g2273 280 SMART tpr_5 40 73 IPR019734 GO:0005515
Vra5g2273 280 SMART tpr_5 74 107 IPR019734 GO:0005515
Vra5g2273 280 SMART tpr_5 3 36 IPR019734 GO:0005515
Vra5g2273 280 SUPERFAMILY TPR-like 7 121 IPR011990 GO:0005515
Vra5g2273 280 MobiDBLite consensus disorder prediction 247 261 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2273 2 121 Calmodulin-binding Proteins AT3G25230 32.576 2.37e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2273 - - gmx:100792046 424.861