Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2210 ATGGAGTTGGCTTTGAAAATTGCTGGTAAGATCAGTGTAAATGATCGTTTTTCTGTATATATAGTTATACCAATGTGGCCAGAGGGTGTTCCAACAAGTGCTGCTGTTCAAGAAATCTTGTTCTGGCAGGGACAGACAATGTCTATGATGTACAAGATTATTGCTGATGCCCTTGCAAAAGCAGGTCTCTCTGATAAGTATCATCCACAAGATTATCTCAATTTTTACTGCCTTGGAAAGAGAGAACCCCCAAGCTCAAATGTTTCTCCAACGTCAAGTCCATCTGATAACCGCGCTTTGAACTTCCTCTCCTGGGTGGGCTATGTTCTCCTCTGGTTCCGAGGCCAAGGTTTCGCCGATCACTTGACGAAGAAAGGGACCAGTGGATGCGAATCGATTACCAACTTGTTCGCCTGCTATGGCAATCCATCCACCCTACATTACTGGTTCACTTCCGTTCCTACAGCTCCTGCTGCGACCTCTGGAACCAGCTCATGCCGCGACGTCGGCGAGCTGCTCGCGCACATTGTTCGTGTATGTGGATCTTTGTGTTGGCCTCTTTTATGTGGTCCGTGTGTATGTGGACACCTTTGTGTATGGCTTTAA 606 0.4686 MELALKIAGKISVNDRFSVYIVIPMWPEGVPTSAAVQEILFWQGQTMSMMYKIIADALAKAGLSDKYHPQDYLNFYCLGKREPPSSNVSPTSSPSDNRALNFLSWVGYVLLWFRGQGFADHLTKKGTSGCESITNLFACYGNPSTLHYWFTSVPTAPAATSGTSSCRDVGELLAHIVRVCGSLCWPLLCGPCVCGHLCVWL* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2210 201 PANTHER PHOSPHOLIPASE D 1 91 IPR015679 -
Vra5g2210 201 PANTHER PHOSPHOLIPASE D 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2210 Vra-Chr5 28063920 28065886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2210 1 97 Phospholipase D Gene Family (Wang group) AT4G00240 62.245 1.70e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2210 K01115 - vra:111241698 419.468