Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2107 ATGGTACAAAGAAAGGTTCCTGGCAAGCTTGGAATCCAAGCTGAACATGTTAAATCAGACAAGAGGTTGGCAAATATGAAGCTATCTTCATCTCAGCACCAAGATGGCAAAAGTAGAGGGGCTGATATGAAGAAGAAAATGAGAAAATCAAGGTCAATAAACCTTTCTGATCTTGAGGCTCTTCAATCATCATCTTCATCATCATCACCTTCAAAGAGAAGCTTCTCTCAACCAGGAAAGCCACCTCCTCTTCATACTCCAACCACTGCAGCATCAGCATCACCTCAGAAGCAGCAACCTTTGTTCAGAACAACAGATGTTTCACCCAATTACATGAAGCCAACAAGCAGTTCGCATGCAAAAAAGGAACTTTTCCCGGTAAGCCACAGGAACGCTCAATCTGCTTCTGATTTTAAGAATCTTCCAAGAAAATTTTCCACTGATTCCAAAGCTGCCTGTGCTAAAAAACCTGCCAAAGCCTTGGCAAGATCGTCTAGTTTGAGTTTGGTGAGAACATTGACAAAAACCACTACTTTCAAGGCTTCTAGAGCCTGTTCTAGAAAATCCTCCAGGGCTGTTATGTGTGCAGATATGACTGCACCACAGAGAGCCACTTGTTCTTCAACTTTGAAGGACTCAAAGTTCCCTTCGTACCTCATGCTTAGCCCTGGAGCAACTGAGTCAGAGGGAACTTCAGCCATGAAGGTTTGCCCTTACACATATTGTTCCCTTAATGGTCATCATCATGTTGATTTGCCCCCATTGAAGAGCTTCATGTCAGCAAGGAGGCGCCTTCTGAAGACGCAGAAGCGCGCCAAGCTTGAAGCTCTCAGCCCTCGGAGACTGAAGGTTCCCCTTGAGACAGATAAGAAGGACTCTGATGTTGAGCAGAACGTTTTTGAGGAAAAACCTGCTTGTGATGAAATTGGCATTGATATCTTCATTGAAATCTATGCCAATGAAAAGGATGCAAAACCAACCGGAGCAGAAGAAATAGGGAGAAGAGATTTTCTCCAAGAGATTGAGGATCAAGCAGATAACAAGTCACCAATTGAAGATAATGGCGTAGCAGCAAGAACCATTGGTTTTCCTTCTCCCTCTGTACGTGAACTTGATCTTGAGGAGGATTTGAAAAAGCCCTTTGATGACGTTGCAATCGAAGTAGATACCAACGGCAACTTTATCCAAGAACAAAGTTCACAAGATGCAGATGAAGATCACCAACCTACTGTCTGGTGTCATGAAGAAATGAGCATGGGAAGCTACTGCAGCGATGGGGAACAAGACATGGGGGATGTTGACATGGATGATTCTGATTCCAGAACCTATGAAATGGAGTGGAAGGAGGAGAGATTTTGCGGATTCGATCACGAAGAGGATGCTGATTCTTCCGTTTACACAGAAGAGGACAACGACTCAAGAGTTGAGTCCTCATCAGAGAGTTCTCATGATGTGTCAGTGACATGGTTAGATGACATCCTTGGCAGCTACTATGAGGACTTTCTGGTTGATGAAACACACAAAGTGGCCAATTCAGAAGAAAACACCCATTTTGAAGAATCTATTGGCATTAGTTCCGTCCTTGAAGACACAAATGGAAGCATTGAAACCAAAGAAATCGAGTACTCCTCTACGGGTTGTGACCAATCTTCATTTACAGAGGAAATATTTGAGTATATGACAAATGCACAAGATAATGGTGGAGAAGATGAGAAACATGTGGATGATGAGACCGGTTGCAACTCAAAGACACTTGATGAACAGACATATGACAGCACTCAGAATGAGATGGTGAGTGACACTAGCACAACTGACGAGACAGGTGAAGATGGATGTTCAAGCAGCCTAGAGAACAATGATGAGAGCAGTAAAATGGAGAGGGAAATTGAGTTGGTGAATGTGTCTGAGGAAAGTAACATGACTGATCAAGATCAGGATTTGTTGGAAAAAGACCAAGGTAAAGGTAGAAGGTTCCAAAGAACAAGTTGCATAGATAGTGAAGAGGAAAACACAAGCAAGAATTGGAAAGGTTCAATTAGGAGAAAGAGGGTTGTTGAAGATGATGACGAGATGAGAAAGTTCAACCCCAAAGAGCCAAATTTCCTGCCTTTGGTTCCTGAGCCAGAAAAAGAAAAGGTTGACCTGAGGCATCAAATGATGGATGAGAGAAAGAATTCAGAGGAATGGATGCTTGATTGTGCACTCAGACAAGCTGTGACAAAACTTGCACCAGCTAGGAAGAAGAAGGTGGCACTGCTAGTTGAAGCCTTTGAAACCGTGATGCCAGCACCCAAATGTGAAAACCGTGTGAGAAACAATTCAGCATTTGGTCATGCAGGAAGAATTCAAGCTTGTAGCTGA 2361 0.4316 MVQRKVPGKLGIQAEHVKSDKRLANMKLSSSQHQDGKSRGADMKKKMRKSRSINLSDLEALQSSSSSSSPSKRSFSQPGKPPPLHTPTTAASASPQKQQPLFRTTDVSPNYMKPTSSSHAKKELFPVSHRNAQSASDFKNLPRKFSTDSKAACAKKPAKALARSSSLSLVRTLTKTTTFKASRACSRKSSRAVMCADMTAPQRATCSSTLKDSKFPSYLMLSPGATESEGTSAMKVCPYTYCSLNGHHHVDLPPLKSFMSARRRLLKTQKRAKLEALSPRRLKVPLETDKKDSDVEQNVFEEKPACDEIGIDIFIEIYANEKDAKPTGAEEIGRRDFLQEIEDQADNKSPIEDNGVAARTIGFPSPSVRELDLEEDLKKPFDDVAIEVDTNGNFIQEQSSQDADEDHQPTVWCHEEMSMGSYCSDGEQDMGDVDMDDSDSRTYEMEWKEERFCGFDHEEDADSSVYTEEDNDSRVESSSESSHDVSVTWLDDILGSYYEDFLVDETHKVANSEENTHFEESIGISSVLEDTNGSIETKEIEYSSTGCDQSSFTEEIFEYMTNAQDNGGEDEKHVDDETGCNSKTLDEQTYDSTQNEMVSDTSTTDETGEDGCSSSLENNDESSKMEREIELVNVSEESNMTDQDQDLLEKDQGKGRRFQRTSCIDSEEENTSKNWKGSIRRKRVVEDDDEMRKFNPKEPNFLPLVPEPEKEKVDLRHQMMDERKNSEEWMLDCALRQAVTKLAPARKKKVALLVEAFETVMPAPKCENRVRNNSAFGHAGRIQACS* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2107 786 MobiDBLite consensus disorder prediction 1 126 - -
Vra5g2107 786 MobiDBLite consensus disorder prediction 55 75 - -
Vra5g2107 786 MobiDBLite consensus disorder prediction 565 582 - -
Vra5g2107 786 MobiDBLite consensus disorder prediction 87 117 - -
Vra5g2107 786 MobiDBLite consensus disorder prediction 453 483 - -
Vra5g2107 786 MobiDBLite consensus disorder prediction 643 659 - -
Vra5g2107 786 MobiDBLite consensus disorder prediction 561 659 - -
Vra5g2107 786 MobiDBLite consensus disorder prediction 453 479 - -
Vra5g2107 786 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 786 IPR044681 GO:0005516
Vra5g2107 786 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 786 - -
Vra5g2107 786 MobiDBLite consensus disorder prediction 37 53 - -
Vra5g2107 786 SMART CaM_binding_2 650 762 IPR012417 GO:0005516
Vra5g2107 786 Pfam Plant calmodulin-binding domain 657 762 IPR012417 GO:0005516
Vra5g2107 786 MobiDBLite consensus disorder prediction 583 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2107 Vra-Chr5 26851214 26854590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2107 509 786 Calmodulin-binding Proteins AT2G38800 34.228 9.65e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2107 - - gmx:102660315 1127.85