Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2082 ATGCCAGATGTTCAAGCCCTTGTTAATGAATTTGTGAATCTGCTCAAGAAGCGTAAAATTGAAGGGTCTCAGGCCACGGCGAAGCAGACAGCAGAGTTGCTCCGGTCAGTGATTTCGCATCAGCGGCTGCCACACACAAACCAGGCCACATCTCTGATTAATGCAGTAAGGGCTGTGGGGGAGAAGATTATTGATGCTAATCCTATTGAGTTATCTGTGGGAAATATCGTGAGGCGTGTTCTTCACATTATAAGGGAGGAGGATCTTTCCCTTGTTACAGATGCTATGGCTGGTTTTGGAAGTGATGATGAAGATGATGTCGAGCGAGATGATCATCCTGCATTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCACCCTCATTACAAACTCTTCTAGAGGACGTGACTGATTCAGCTGCCGTTCCACCAACTCCCTCCTCGACGGGTGACTCTGATGGGAAAAGTAGATCTGTTGAAAAGGGTACAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTCAATGAACTTATTCAAGACATAACCTCTTGCCATGAACAAATAGCAGAACAAGCAGTAGAGCATATTCATCAAAATGAGGTAATATTGACGCTAGGCAGTTCAAAAACAGTGTTCGATTTTCTTTGTGCTGCAAAGGAGAAAAAGAGATCATTTAAGGTTTTTGTTGCTGAAGGTGGCCCGAGGTATCGCGGACATCTCCTTGCGAAAGAATTGGCTGCTAGAGGCTTACAGACCACAGTAATTGCTGATTCTGCAAGTTTTGCTATGATTTCCAGAGTGAATATGGTTATAGTTGGTGCTCATGCCGTCATGGCTAATGGTGGAGTAATTGCCCCAATTGGGTTGCATATGGTTGCACTTGCAGCTCGTAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGAAGTCATAAGTTGTGCCCTTTGTATCCTCACAATCCTCATCTCCTATTGAATGAATTGAGATCCCCATCCGAGCTACTAGACTTTGGAGAATTCTCAGATTTGATGGATTCTGCAACTGGTGTTGGTTCTCTTCATGTTGTTAATCCAGCATTTGATTATGTGCCACCAGACCTTGTTAGTCTCTTCATTACTGGCACTGGAGGGCATAACCCATCATATATGTACCGGCTAATAGCTGATTATTACTCTGCCGCTGATTTGGTGTTGAAACAGAGACCTACTACAGGGAATTGA 1236 0.4466 MPDVQALVNEFVNLLKKRKIEGSQATAKQTAELLRSVISHQRLPHTNQATSLINAVRAVGEKIIDANPIELSVGNIVRRVLHIIREEDLSLVTDAMAGFGSDDEDDVERDDHPALSAAAVAAAARSTLRPPSLQTLLEDVTDSAAVPPTPSSTGDSDGKSRSVEKGTRGRKLKHDVIEAVNELIQDITSCHEQIAEQAVEHIHQNEVILTLGSSKTVFDFLCAAKEKKRSFKVFVAEGGPRYRGHLLAKELAARGLQTTVIADSASFAMISRVNMVIVGAHAVMANGGVIAPIGLHMVALAARRHAVPFVVLAGSHKLCPLYPHNPHLLLNELRSPSELLDFGEFSDLMDSATGVGSLHVVNPAFDYVPPDLVSLFITGTGGHNPSYMYRLIADYYSAADLVLKQRPTTGN* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2082 411 MobiDBLite consensus disorder prediction 140 157 - -
Vra5g2082 411 PANTHER BNAA01G32370D PROTEIN 55 403 - -
Vra5g2082 411 PANTHER BNAA01G32370D PROTEIN 8 54 - -
Vra5g2082 411 MobiDBLite consensus disorder prediction 140 171 - -
Vra5g2082 411 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 55 403 - -
Vra5g2082 411 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 8 54 - -
Vra5g2082 411 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 400 IPR037171 -
Vra5g2082 411 Gene3D - 190 395 IPR042529 -
Vra5g2082 411 Pfam Initiation factor 2 subunit family 19 385 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2082 Vra-Chr5 26568230 26575868 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2082 1 403 Eukaryotic Initiation Factors Gene Family AT3G07300 76.039 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2082 K03754 - gmx:100807877 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2082 5 26568230 26575868 Vra5g2082 5 26568230 26575868 ECH