Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2071 ATGGAAGTAATTGCTCAGATAGTATTACAAAACTTGAACTCTTTTGCTCAAGAGGAGTTTGGAATCATTTGGAATCTCAAAGATGACGTACAGCAAATGAAGCGCACAGTATCTGCAATAAAGGCTGTGCTCCTGGATGCAGAGGGAAAGGCCAACAACCTTCAAATCAGTAATTGGTTGGAGGAGCTGAAAGATGTACTTTATGATGCAGATGACTTGCTCAATGATATCTCCTCTGAAGCAATGAAAAGAAAAGTGATTGGTGCTAGAAAAATCTTGAGAAAGATACAGGTTTTCTTCTCCCAAGAAAACCAAATTGTCTATAGTTTTAAATTAGGTCATCAAATGAAAGCAATCCAGAAGAGGCTAGATGCTATTGCTAAAAACAAGATTACTTTGCAATTGACTGACCGCCCTATGGAGACTCCAATTGCATATAGGAGGCAGAGACAAACTTATTCTTTTGTGAGAGAAGATGATGTTATTGGGAGAAAGGAGGAAAAGAAACTTCTTGAAAGTTATTTGCTTGACACCAAAGTGAGTGTGATAGACAATGTGTCTGTATTAGCCATAGTTGGGTTTGGAGGACTAGGTAAGACTACCCTCGCTCAACTTGTTTTTAATGACAATGCTGTCCAATGCTCTTTTGAGCAGAAAATGTGGGTGTGTGTCTCAGATGAATTTGACATCAGCAAAATAGCCGAAAAGATGATTGGGAATGATAAGAATAGTGAGATTGAGCAACTACAGCAAGATCTTAGAAACAAAGTTCGTGGAAAAAAGTTTCTACTTGTGCTGGATGACGTGTGGAATGAGGATAGGGAACTGTGGCTTAAATTCAAGAGCTTAGTCGTGGAAGGAGGTAAAGGAAGTGCCATAATTGTAACAGCACGTAGTAGGACTGTGGCGAAAATAGTAGCCACACATCCACCCCTTTTCTTGAAAGGTCTTGATTTAGAAAGATCTTGGAAGCTATTCTCTCGAGTGGCTTTTGATGGGGGGAAAGAACCAAATGATATGGAATTGTTAGCCATGGGAAGGGATATTGTTAAAAAATGTGCTGGGGTTCCCCTTGCCATAAGAACTATTGGCAGCCTCTTGTACTCTCGAAACTTGGGTCGGAGTGATTGGCAATATTTTAGTGAAGTTGAGTTTTCAAAGATAGATCAACACAAGGACAACATTTTTTCAATCCTTAAACTGAGTTATGATCATCTTCCTTCATTTTTGAAAAAGTGTTTTGCTTATTGTTCATTGTTTCCAAAAGATTTTGAGTTTGACAAGAAAACACTCATTCAGTTATGGGTGGCTGAGGGGTTCATTCAACCATCACGAGACAATAGATGTGAAGAAGATGTTGGTCATGAGTACTTCATGAATTTGCTGTCAATGTCACTTTTCCAAAATGTGACTTTAGATGATTGTGGTGACATTCTTACTTGTAAAATGCATGACCTGATACATGATCTAGCACAGCTTGTTGTTGGAAAAGAATACGCCTTTGTTGAAGGAAAAAAAGAGCACATTGAAAACAGAACACGTTATTTGTCCTCTTGTACTTCATTACATTTTTCAGAGAAAACATCATCATCTTCCAACAAGTTAAGGACATTTATTTTGCTTGGACAGCCAGAGCCACTTTATGGAAGACAAAATTTGGGTCCTCCGCCAAGTCTTCATTTTCCTTTTCTCTTAAGCATAAAGTGCCTACGGGTGTTAACACTCTGTGGGTTGCATTTGATAACAATTCCAGATAGTATTCGAAAGTTGAAGCAATTGAGATATCTTGATCTTTCATTTAATAGGTTTCTGGTAAGTCTTCCACCAGATGTTACTAGCCTACATAACTTGCAGACTTTAAAACTATCTCGGTGTGGCAAATTTAAAGAATTACCCTCAGATATCAACAAAAGTCTTAGGCATCTTGAATTGAATGATTGTGGGGAATTGAGATGTATGCCATGTGGGTTGGGACAATTGACCAATCTTCAAACACTGACACATTTTATATTGGACTCTGAAAGTAAAAACGTTGATATAAGTGAATTGAGTGGGCTAAACAACCTTAGAGGAAAATTAGTAATTAAATGCTTGGATTCCCTGCGAGAAAATGCTGCAGTGGTTGAGTCTGCAAACATATTACTGGAGAAGCAACATCTTCAAGATTTGGAATTACGGTGGGGGTTCCGTGAGACTAAATATCGGAAGGATCCTGTTAAAAATAGACGTAAGGAAGAAGAAAACAGATGGGTGGACGATGAAAATAAAATAAAAGACGAAAAGATATTGAAAGGCCTGCAGCCACATCATTCAATAAAAAGACTAGTAATAGATGGATATTGTGGCAACAGTTTACCAGACTGGATAGGGAATCTCTCATCACTCTTGAGTCTTGAAATCAGTAATTGCTATTGTTTGAAATCAATACCTGATGGAATTCGGAATCTTGTATCTTTACAACGACTCTGCATATATAATTGCTCAATGCTAGAAGGAAGATGTGCTAGAGGACATGGTGAAGAATGGTCAAAAATTGCTCATATCCCATTAGCTATTGTCTCTGCCTTTAATCCAACCGATCTCAGGTATATTAATTGA 2598 0.3799 MEVIAQIVLQNLNSFAQEEFGIIWNLKDDVQQMKRTVSAIKAVLLDAEGKANNLQISNWLEELKDVLYDADDLLNDISSEAMKRKVIGARKILRKIQVFFSQENQIVYSFKLGHQMKAIQKRLDAIAKNKITLQLTDRPMETPIAYRRQRQTYSFVREDDVIGRKEEKKLLESYLLDTKVSVIDNVSVLAIVGFGGLGKTTLAQLVFNDNAVQCSFEQKMWVCVSDEFDISKIAEKMIGNDKNSEIEQLQQDLRNKVRGKKFLLVLDDVWNEDRELWLKFKSLVVEGGKGSAIIVTARSRTVAKIVATHPPLFLKGLDLERSWKLFSRVAFDGGKEPNDMELLAMGRDIVKKCAGVPLAIRTIGSLLYSRNLGRSDWQYFSEVEFSKIDQHKDNIFSILKLSYDHLPSFLKKCFAYCSLFPKDFEFDKKTLIQLWVAEGFIQPSRDNRCEEDVGHEYFMNLLSMSLFQNVTLDDCGDILTCKMHDLIHDLAQLVVGKEYAFVEGKKEHIENRTRYLSSCTSLHFSEKTSSSSNKLRTFILLGQPEPLYGRQNLGPPPSLHFPFLLSIKCLRVLTLCGLHLITIPDSIRKLKQLRYLDLSFNRFLVSLPPDVTSLHNLQTLKLSRCGKFKELPSDINKSLRHLELNDCGELRCMPCGLGQLTNLQTLTHFILDSESKNVDISELSGLNNLRGKLVIKCLDSLRENAAVVESANILLEKQHLQDLELRWGFRETKYRKDPVKNRRKEEENRWVDDENKIKDEKILKGLQPHHSIKRLVIDGYCGNSLPDWIGNLSSLLSLEISNCYCLKSIPDGIRNLVSLQRLCIYNCSMLEGRCARGHGEEWSKIAHIPLAIVSAFNPTDLRYIN* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2071 865 SUPERFAMILY L domain-like 482 829 - -
Vra5g2071 865 PANTHER OS05G0414200 PROTEIN 28 823 - -
Vra5g2071 865 Gene3D - 317 402 IPR042197 -
Vra5g2071 865 Pfam Rx N-terminal domain 6 93 IPR041118 -
Vra5g2071 865 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 417 IPR027417 -
Vra5g2071 865 Gene3D - 403 493 IPR036388 -
Vra5g2071 865 PANTHER DISEASE RESISTANCE PROTEIN RP 28 823 IPR044974 GO:0006952
Vra5g2071 865 Gene3D - 146 309 IPR027417 -
Vra5g2071 865 Gene3D Ribonuclease Inhibitor 557 851 IPR032675 -
Vra5g2071 865 CDD RX-CC_like 2 128 IPR038005 -
Vra5g2071 865 PRINTS Disease resistance protein signature 188 203 - -
Vra5g2071 865 PRINTS Disease resistance protein signature 256 270 - -
Vra5g2071 865 PRINTS Disease resistance protein signature 353 367 - -
Vra5g2071 865 PRINTS Disease resistance protein signature 588 604 - -
Vra5g2071 865 Coils Coil 698 718 - -
Vra5g2071 865 Gene3D - 5 117 - -
Vra5g2071 865 Pfam NB-ARC domain 185 404 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2071 Vra-Chr5 26438573 26442361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2071 185 549 WRKY Transcription Factor Family AT5G45050 23.711 4.12e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2071 - - gmx:100781872 1252.27