Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2070 ATGCCACCCTCTTTCATCACTCTTTTCATCTTTTTCTCTTCTTCTTCTCTTATTCTTCTCCTGTTTTCGCCTGCAACTGCACACATCATTATCATAATAATCATGGGTATGGCTGCAGACGCACAGTTTCATGTTTTGGCTGTCGATGATAGCCTTATCGACAGAATGTTGATTGAGAGACTCCTCAAAACCTCTTCTTTTCATGTTACTGCTGTGGATTCTGGTAGTAAGGCTTTGAGGTTTCTCGGTTTGGTTGAAGATGAAAAGAGAACTGAAGAGCCTCCCACCATTGCTTTAGAAGCCAATCAGGATGTAGAAGTAAACCTGATCATAACTGATTACTGTATGCCAGAAATGACAGGGTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCTCTTAAAGACATACCAGTGGTGATTATGTCCTCAGAGAATGTTCCATCAAGGATCAACAGATGCCTAGAAGATGGAGCTGATGAATTCTTTTTGAAACCAGTTCAACAGTCAGATGTAAACAGGCTCAGACCTCATCTGATGAAATCAAAAGTTAAGGATGAAGAAGAGGAACAGATGAATAACAAAAGGAAGGAAACAGCAGAAGAAGAAGAAGAAGAAAAGCATTCCCCAGATAAAAGCAGGACAAAAATGGAGCCTTAA 660 0.397 MPPSFITLFIFFSSSSLILLLFSPATAHIIIIIIMGMAADAQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALRFLGLVEDEKRTEEPPTIALEANQDVEVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEDGADEFFLKPVQQSDVNRLRPHLMKSKVKDEEEEQMNNKRKETAEEEEEEKHSPDKSRTKMEP* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2070 219 ProSiteProfiles Response regulatory domain profile. 44 180 IPR001789 GO:0000160
Vra5g2070 219 MobiDBLite consensus disorder prediction 176 219 - -
Vra5g2070 219 SUPERFAMILY CheY-like 43 175 IPR011006 -
Vra5g2070 219 SMART REC_2 43 179 IPR001789 GO:0000160
Vra5g2070 219 MobiDBLite consensus disorder prediction 174 219 - -
Vra5g2070 219 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 23 216 - -
Vra5g2070 219 Gene3D - 44 217 - -
Vra5g2070 219 Coils Coil 185 206 - -
Vra5g2070 219 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 216 IPR045279 GO:0009736
Vra5g2070 219 Pfam Response regulator receiver domain 45 172 IPR001789 GO:0000160
Vra5g2070 219 CDD REC_typeA_ARR 45 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2070 Vra-Chr5 26430472 26431946 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2070 35 197 Response Regulator Gene Family AT3G57040 63.855 5.21e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vra5g2070 Response_reg 8.4e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2070 K14492 - gmx:100818762 292.352