Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2061 ATGATGGCTGAATTGGTGGCCCGAACGGGTCGGCATCAGCAGCGATACGAACATGGGTATCGACTAATCGCAGGGTGTGTTCCATTTAGATATAGAGACGGCAATGGCTGTGGGGATTCTTCTGAAAAGACTGTCGAAGTGCTTATGATTAATTCAACCAGTGGACCAGGTCTTTTATTTCCGAAGGGAGGTTGGGAGAATGATGAAACTGTTGAGGAGGCTGCTGTAAGAGAAGCTATTGAAGAAGCGGGAGTTCGAGGAGATCTAATGCATTTTCTTGGGTACTATGAATTTAGGAGTAAGACCCTCCAAGATGAGTGCAGTCCAGAAGGTTTATGTAAAGCAGCAATGTTTGCATTGTTTGTGAAAGAGGAACTTGAGTCATGGCCGGAGCAAAGCACAAGAAAAAGGAGTTGGTTAGCTGTATCTGAGGCACTGGGAAGCTGCCGGCATGCATGGATGAGGGATGCCCTGGAATGCTTCTGTAAATGGCATGAGGAGTGCAATGGAGGATCGAGACTGCACTAG 528 0.4716 MMAELVARTGRHQQRYEHGYRLIAGCVPFRYRDGNGCGDSSEKTVEVLMINSTSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRGDLMHFLGYYEFRSKTLQDECSPEGLCKAAMFALFVKEELESWPEQSTRKRSWLAVSEALGSCRHAWMRDALECFCKWHEECNGGSRLH* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2061 175 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 2 167 - -
Vra5g2061 175 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 163 - -
Vra5g2061 175 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Vra5g2061 175 SUPERFAMILY Nudix 5 164 IPR015797 -
Vra5g2061 175 ProSiteProfiles Nudix hydrolase domain profile. 19 162 IPR000086 -
Vra5g2061 175 PANTHER OS03G0810300 PROTEIN 2 167 - -
Vra5g2061 175 Pfam NUDIX domain 46 155 IPR000086 -
Vra5g2061 175 CDD Nudix_Hydrolase_9 24 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2061 Vra-Chr5 26271774 26277140 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2061 K07766 - gmx:100811962 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2061 5 26271774 26277140 Vra5g2061 5 26271774 26277140 ECH
Vra2g0052 2 456291 458547 Vra5g2061 5 26271774 26277140 PCT