Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2008 ATGTGTCAAGCTAAAGCGTGTTTGATTGTGTACGATGATGACAGCGACAACGTTGGACCAGAAATCTGGCCTCAAGATTCTGCAGCGGTACAATCCATGATACAAAATTATGTTTGTCAAAGCACTGAGAAATCTCCCAAGACCTTTGAGATTCAAGACTTTTTCGACAACAGAAAGAACATGATTGAAGCTGAGATTTCCAAATTGCACAAACAAGAAAGAGAGATCATGTATCCAACATGGGATCAGAGTTTGAACAACATGGATAAGGAGCAACTGTGGGCGGTCCTTGCTGATGTGAATGCTAAGATTGGAGCCTGTGATCAGAGAATCGCCATGTTGAAAAACAAGAATAATCAAGATCATGAAATCAGCATCGATGTCATGGAAAATATGTCTCATCAGCAACCAAAACCAAGTGTTTCTCATTCGAGCCAACTCAATTTCATGTGTCAGAAGAACCAACAACAGCAAGTGATGTCAATTGAAACATTGATGTCTGTTGATGAAAAATATGATCAGGTGGTGGGTTTTACTGATCAAGTTGGTGTACCGCTAGATTCGACATTTCAGGTTGGTGGAGTTTCTGACCATGGAATTAACATGATGAGAAACATTGAACGAGGTGATGCTTTCTTTCGTTACATGCCAAACATGGTTGCTGAGAGAACTACCTCGTCACAACCAAGTGAACTCAGTTTCATGCAGAACAAATCCCACGTTGGTGTTCCTCCAAATTCAACTGATCAATTTGGTGAGTCTTTGAAGTGGTTTAATCAATTTGATGAGTTTGAGTGGCTTAAAGAATCCAATGGGACAAAAGATTTGTCAGATTCAGTTCTTGGTAATTTTGTGGATTGGACTAGTCAACCACAGTTTTCTACCTTGCAGTTGCAGCAGAAAATTCATGGTCAATCTCAGAATGAGCAACAAGAAGTAGATTTGCCTCCATTGCCACCTTCACTGTTTTATCAGTCTATAGAACTTTGA 990 0.399 MCQAKACLIVYDDDSDNVGPEIWPQDSAAVQSMIQNYVCQSTEKSPKTFEIQDFFDNRKNMIEAEISKLHKQEREIMYPTWDQSLNNMDKEQLWAVLADVNAKIGACDQRIAMLKNKNNQDHEISIDVMENMSHQQPKPSVSHSSQLNFMCQKNQQQQVMSIETLMSVDEKYDQVVGFTDQVGVPLDSTFQVGGVSDHGINMMRNIERGDAFFRYMPNMVAERTTSSQPSELSFMQNKSHVGVPPNSTDQFGESLKWFNQFDEFEWLKESNGTKDLSDSVLGNFVDWTSQPQFSTLQLQQKIHGQSQNEQQEVDLPPLPPSLFYQSIEL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2008 329 PANTHER PROTEIN, PUTATIVE-RELATED 1 186 - -
Vra5g2008 329 PANTHER MADS BOX PROTEIN 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2008 Vra-Chr5 25656173 25657162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2008 1 104 Type I MADS-box Gene Family AT5G55690 28.704 1.29e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2008 - - var:108332731 596.66