Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1963 ATGGATGCAGATATGGAAAGCTTAAAAACACCATTGGAGGGTGTTAAAAAGGACCTTCAAGGAAGAGCGGAGTTCTACAAGGATGATTGGACGACTGGTCTCTATTCAAAAACGGCAATATTGGCCCCAACTACCTATATTTTCTTTGCTTCTGCTCTTCCAGTCATTGCCTTTGGCGAGCAGCTAAGTAGAGACACAGATGGAAGCTTGAGCACTGTAGAAGCGCTGGCTTCTACAGCTATTTGTGGAATCATACATTCAATTTTGGGTGGCCAGCCTCTCTTAATCGTAGGAGTAGCTGAGCCCACTATCATTATGTACACCTATTTGTACAACTTTGCCAAAGAGAAGGATTCCGTGGGACGAGAACTCTTTTTAGCTTGGGCAGGATGGGTTTGTGTATGGACTGCTCTCTTGCTAGTTCTTCTAGCAATATTCAATGCTGGAAATATAATCAATAGATTCACAAGGATCGCAGATGAGCTTTTTGGCATGTTGATCACAGTCTTGTTCATTCAAGAGGCTATAAAGGGAATTGTAAGTGAGTTTAATGTTCCTAAAGAGGGAGACCCAACATTGGAAAAGTACCATTTTAATTGGCTGTATGCAAATGGATTGATGGGCATTATATTCACCTTTGGCCTTCTCTTTACGTCTTTAAATAGCAGAAGAGCAAGGTCATGGTTATATGGCACAGGGTGGCTTAGAAGTTTCATTGCAGACTATGGAGTACCTTTCATGGTGGTGGTGTGGACAGCACTATCATTCTCAGTACCGAGTAAAGTGCCTTCTGGAGTTCCTAGAAGGCTCACCTCTCCTCTTGTTTGGGAGTCTACATCTTTATATCACTGGACAGTAATCAAAGATATGGGGAAAGTTTCTCCGTCATATATTTTTGCTGCTTTTATTCCTGCCATAATGATAGCGGGGCTTTACTTCTTTGACCATAGTGTTGCTTCCCAGATGGCACAACAGAAGGAATTCAATCTCAAGAAACCTTCTGCATACCACTATGACATATTGTTGCTGGGACTAACGACTTTGCTTTGTGGATTGATTGGCTTACCTCCTTCAAATGGAGTTCTTCCTCAATCTCCTATGCACACTAAGAGCCTCGCTGTTCTCAAGAAACGGATGATCCGAAAAAAAATGATTAAAAGTGCTAAGGAAAGCATAAATCTTAAAGCTAGCAATTCTGAAATTTATGGAAATATGCATGCGGTGTTTATAGAAATGGATAACTGCCCAGATAATCATTCAGTGGACAAAGAACTAGAGGATTTGAAAAATGTTGTCTTAAACGGTGAAGACAATGGACATGACAAAAAGAGTAACTTTGATCCTGAAAAACACATTGATGCATATTTGCCTGTCAGAGTAAAAGAGCAGAGAGTGAGCAATCTCTTACAATCAATCTTTGTTGGAGCATCAGTCTTTGGCATGCCTGCCATAAGAAAGATACCAACTTCAGTTCTGTGGGGATATTTTGCTTACATGGCCATTGATAGTCTTCCAGGAAATCAATTTTGGGAAAGGATCTTACTCCTTTTTGTAACACCTAGTAGGTGGCACAAGTTGTTGGAAGGGGATCATGCTTCCTATGCTGAGTCAGTACCTTACAAATACATAGTATTGTTTACACTCTTCCAATGTATGTATTTCTTGGTTTGCTTTGGAGTGACATGGATTCCCATAGTTGGAATATTGTTCCCCTTGCCTTTCTTTTTCCTGATAACACTGAGGCAGCATATACTCCCCAAGTTGTTCAAGCCTCACCATCTTAGGGAACTGGATGCAGCTGAATACGAAGAAATAGTTGTTTCTCCAGGACTAACTTTCAATAGGTCTTTCAAGGAGGGAGAATCACCAAGAGATGAATCAATGGAAATAGTTGATGCTGAAATATTAGATGAGTTAACTACAAATAGAGGGGAGTGGAGGGTTAGAAATGTCAGCTTTAGTGAGGAAAGAAACCCCCAGGTGTACTCTGAGGAAACCGGATCTCCAGATCCAAATCCAACTTGTTAG 2028 0.4088 MDADMESLKTPLEGVKKDLQGRAEFYKDDWTTGLYSKTAILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVEALASTAICGIIHSILGGQPLLIVGVAEPTIIMYTYLYNFAKEKDSVGRELFLAWAGWVCVWTALLLVLLAIFNAGNIINRFTRIADELFGMLITVLFIQEAIKGIVSEFNVPKEGDPTLEKYHFNWLYANGLMGIIFTFGLLFTSLNSRRARSWLYGTGWLRSFIADYGVPFMVVVWTALSFSVPSKVPSGVPRRLTSPLVWESTSLYHWTVIKDMGKVSPSYIFAAFIPAIMIAGLYFFDHSVASQMAQQKEFNLKKPSAYHYDILLLGLTTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKRMIRKKMIKSAKESINLKASNSEIYGNMHAVFIEMDNCPDNHSVDKELEDLKNVVLNGEDNGHDKKSNFDPEKHIDAYLPVRVKEQRVSNLLQSIFVGASVFGMPAIRKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWHKLLEGDHASYAESVPYKYIVLFTLFQCMYFLVCFGVTWIPIVGILFPLPFFFLITLRQHILPKLFKPHHLRELDAAEYEEIVVSPGLTFNRSFKEGESPRDESMEIVDAEILDELTTNRGEWRVRNVSFSEERNPQVYSEETGSPDPNPTC* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1963 675 MobiDBLite consensus disorder prediction 656 675 - -
Vra5g1963 675 Gene3D Helical hairpin bin 22 64 - -
Vra5g1963 675 Pfam HCO3- transporter family 458 548 IPR011531 GO:0006820|GO:0016021
Vra5g1963 675 Pfam HCO3- transporter family 12 184 IPR011531 GO:0006820|GO:0016021
Vra5g1963 675 Pfam HCO3- transporter family 203 379 IPR011531 GO:0006820|GO:0016021
Vra5g1963 675 PANTHER BORON TRANSPORTER 4-RELATED 5 666 - -
Vra5g1963 675 PANTHER ANION EXCHANGE PROTEIN 5 666 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1963 Vra-Chr5 25330853 25333987 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1963 2 665 Antiporters AT1G74810 66.218 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1963 K24194 - gmx:100811184 1140.18