Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1873 ATGAGTGGCGGAGGAGAAGAAGGAGAGAGTCTGGAGTTCACTCCCACTTGGGTGGTGGCCGCCGTATGCACAGTCATCGTCGCCATCTCCCTCGCCGCAGAGCGCTTTCTTCATTTTGGCGGAAAGTATCTCAAAGCTAAGGACCAGAAGCCGCTCTACGAAGCACTGCAGAAAATTAAAGAAGAGCTCATGCTTTTGGGTTTCATTTCCCTCCTTTTGACGGTTACACAAAACGGCATTACCAAAATCTGCGTTCCCCCGGCCTTCACGCGCCACATGCTTCCGTGTAGCCTTGACCTCGCTCCCAAACATGAATCTCATTTCCAAACATTTTATTTCCCGGGAACACCCAGACGTCTTCTCGCTGCCACTGCGGCGGAACACGCGCCGCCCCACTCCGAGGCTGAGGCGACCGAGACTGGAACCGAGACTGGGTTCTGCGCTCGCAAGAATAAGGTGCCTTTGTTGTCTGTGGAAGCACTGCACCACCTCCACATCTTCATTTTTGTATTGGCTGTCGTACACGTCGCCTTTTCCGTACTCACCGTTGTCTTTGGAGGTGCCAGAATTCGTCAATGGAAACACTGGGAAGATTCAATTGCAAAAAAGAACTACGAAACCGACCGAGTTCTGAAACCAAAGGTGACCAATGTTCAGCAGCATGATTTTATCAGGGGCCGTTTTTCTGGTTTTGGGAAAGATTCTGCTATAGTCGGTTGGATGATATCCTTTTCTAAGCAATTTTATGGATCTGTGACAAAATCGGATTATGTGACGCTAAGACATGGTTTCATTATGACCCACTGCAAGTCAAATCCAAAGTTTAATTTTCACAAGTACATGATTCGTGCCCTTGAAGATGATTTCAAGCAAGTTGTTGGTATAAGTTGGTATCTTTGGCTCTTTGTGGTTATCTTCTTGTTGCTCAATATCAACGGTTGGCATACATATTTCTGGATTGCTTTTATTCCTGTCATTCTTTTGCTTGCTGTGGGCACTAAGCTCGAGCATGTAATAACCCAACTAGCTCATGAGGTGGCTGAAAAGCATGCAGCCATAGAAGGTGACTTAGTTGTGCAGCCATCAGATGAACACTTTTGGTTTCATCGGCCTCGTGTTTTCCTCTTCTTAATTCACTTTATCCTTTTCCAAAATGCCTTTGAGATAGCATTTTTTTTCTGGATATGGGTTACATATGGGTTTGACTCGTGTATAATGGGGCAAGTTCGATACATTATTCCAAGGCTCGTTATTGGGGTATTTATTCAGGTATTATGTAGCTACAGCACCCTGCCACTCTATGCAATAGTTACGCAGATGGGAACTCACTATAAGAGGGCAATATTTAATGAGCATTTGCAACACAACATTGTTGGTTGGGCACAAAAGGCGAAGAAGAGGAAAGAACTAAAAGCTGATGGCCGTCCTGGCCAAGGAAGTTCTCAGGAGAGTGCTAATACAGGAATCCAGCTTGGCTCAATTTTCACGAAGAAGGCATCTGCTCCAGGCGACACTTCTTCTGCCCCCAAAGATGACGGAACCAGCTGA 1548 0.4606 MSGGGEEGESLEFTPTWVVAAVCTVIVAISLAAERFLHFGGKYLKAKDQKPLYEALQKIKEELMLLGFISLLLTVTQNGITKICVPPAFTRHMLPCSLDLAPKHESHFQTFYFPGTPRRLLAATAAEHAPPHSEAEATETGTETGFCARKNKVPLLSVEALHHLHIFIFVLAVVHVAFSVLTVVFGGARIRQWKHWEDSIAKKNYETDRVLKPKVTNVQQHDFIRGRFSGFGKDSAIVGWMISFSKQFYGSVTKSDYVTLRHGFIMTHCKSNPKFNFHKYMIRALEDDFKQVVGISWYLWLFVVIFLLLNINGWHTYFWIAFIPVILLLAVGTKLEHVITQLAHEVAEKHAAIEGDLVVQPSDEHFWFHRPRVFLFLIHFILFQNAFEIAFFFWIWVTYGFDSCIMGQVRYIIPRLVIGVFIQVLCSYSTLPLYAIVTQMGTHYKRAIFNEHLQHNIVGWAQKAKKRKELKADGRPGQGSSQESANTGIQLGSIFTKKASAPGDTSSAPKDDGTS* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1873 515 MobiDBLite consensus disorder prediction 477 515 - -
Vra5g1873 515 Pfam Mlo family 9 475 IPR004326 GO:0006952|GO:0016021
Vra5g1873 515 PANTHER MLO-LIKE PROTEIN 1 514 - -
Vra5g1873 515 MobiDBLite consensus disorder prediction 468 515 - -
Vra5g1873 515 PANTHER MLO-LIKE PROTEIN 1 1 514 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1873 Vra-Chr5 24506999 24512787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1873 3 482 MLO family AT4G02600 70.791 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1873 K08472 - gmx:100785800 903.279