Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1852 ATGGGTAAGATTCTTTGGAGGTTACTTTCCTGCACATTCTTCATCATTCTCTTCAGTTTACTGTTTAAAGTAACGGCAGGCTATCATTCTTCCAAAACATTCATCTTAAGAATCGATTCCGAATCCAAACCCTCCGTTTTCCCCACGCACTACCACTGGTACACCTCCCACTTTGTCCACCCAACTCGCCTTCTCCATCTCTACGACACCGTTTTCCACGGCTTCTCCGCCCTCCTCACCCCCCAACAACTTTCTTCTCTTTCCCACCACCCCTCCGTGCTAGCTGTCTTCGAGGACCGCCGTCGCCACCTTCACACCACGCGCTCTCCTCAGTTCGTTGGCCTCAGAAACCACCGCGGTCTGTGGTCCCAGACTGACTATGGATCCGACGTCATCATCGGAGTCTTCGACACAGGAATCTGGCCTGAACGCCGGAGCTTCAGCGATTCCAACCTCGGCCCCATTCCTGACCGCTGGAAAGGGAGTTGTGACACTGGTGTAAGATTTTCTCCTAACAACTGTAACAGAAAGCTGATCGGTGCGCGGTTCTTCTCCAAAGGTCATGAGGCAAGTGGCACGTTGTTTAACGACACCGTCGAATTTCTTTCTCCAAGGGACGCTGACGGTCACGGAACCCACACGGCGTCAACCGCGGCGGGCCGCTACGTTTTCGAAGCCAGCATGGCGGGATACGCATCTGGAGTTGCAAAGGGCGTGGCTCCCAAAGCCAGACTTGCAATGTACAAGGTGTGTTGGAAGAATTCTGGCTGCTATGACTCTGACATTCTTGCAGCTTTTGACGCTGCCGTAAACGACGGCGTCGACGTCATTTCCATGTCCATCGGCGGCGGCGACGGCATTTCGTCTCCTTACTATCTTGATCCAATTGCGATAGGGTCCTACGGTGCAGTTTCCAGAGGTGTGTTTGTGTCATCCTCGGGTGGAAATGACGGGCCCAGTGGAATGTCGGTGACCAACCTTGCACCCTGGTTGACCACTGTCGCAGCAGGTACCATTGATCGGGATTTTCCGGCGGAGGTTATACTGGGAAACGGACGAAGACTCTCCGGCGTGTCTCTCTACTCCGGAGTTCCGTTGAAGGGGAGAATGTTTCCCTTAATATATCCCGGAAAATCAGGGGTTCTTACGGATTCACTATGCATGGAAAACTCGTTAGACCCAGAACTTGTGAAAGGGAAGATAGTGGTTTGCGACAGAGGAAGTAATCCTAGAGTTGCGAAGGGATTGGAGGTGAAGAAAGCAGGAGGAGTAGGAATGATTCTGGCAAATGGAATATCCAACGGTGAAGGACTTGTTGGAGACGCTCATCTTCTTCCCGCGTGTGCACTTGGTGCTAACTTGGGAGATGAAGTTAAAGCCTACATTTCATCCTCTGAGAACCCAAGGGCCACTATCGAATTCAAAGGAACTGTGGTGGGAATCAAACCGGCACCCGTAGTGGCGTCGTTTTCGGCTAGAGGACCCAACGCGTTGAATTTGGAAATACTTAAACCTGACTTGGCGGCGCCCGGGGTGAACATTCTGGCGGCGTGGACCAATGCGGTTGGGCCGTCAGGGCTTGAGTCAGACACGAGAAGAAGCGAGTTCAACATTTTGTCGGGCACATCGATGGCGTGTCCTCATGTGAGTGGGGCAGCGGCGTTGTTGAAATCCGCGCATCCTGATTGGAGCCCTGCAGCTATAAGGTCTGCAATGATGACAACCGCTACTGTTCTTGACAACACCAACCGTGAAATGGTTGATCAAGCCACTGGGAATGGCTCCACGCCCTACGATTTCGGCGCTGGACATCTCAACCTCGCTCACGCCATCGACCCTGGGTTGATTTTCGACATTACCAACGATGATTACGTCATGTTTTTGTGTGCCATTGGCTACAGGCCCAGGGTGATTCAGGTGATTACCCGATCGCCGCCTAAATGTCCACGGAGGAGGCAGTCGCCGGAGAATCTGAACTATCCGTCCTTTGTGGCGGTCCTGCCAGCGTCTTCATCCTCCAGAAGGTTGTCGTTGCTGAGCAAGACGTTCTTCAGGACGGTGACGAACGTAGGTGAGCCAAATTCGGTGTATTGGGTGTTGTTAGAGATGGAGGCGGAGGGATTGACGGTGACGGTGAGGCCGTCGAGGCTAGTGTTTTCGGAGGCGGTTAAGAAGCGGAGTTTCGTAGTGACGGTGACGGGAGATGCAGGGAATCTGGTGCTGGGCGAGGCCGGAGCGGTCTTCGGGTCGCTTTCGTGGACCGATGGGAAGCACGTTGTTCGGAGCCCCATGGTTGTGACTCAAGCTCAGCCGCTTTAA 2319 0.5339 MGKILWRLLSCTFFIILFSLLFKVTAGYHSSKTFILRIDSESKPSVFPTHYHWYTSHFVHPTRLLHLYDTVFHGFSALLTPQQLSSLSHHPSVLAVFEDRRRHLHTTRSPQFVGLRNHRGLWSQTDYGSDVIIGVFDTGIWPERRSFSDSNLGPIPDRWKGSCDTGVRFSPNNCNRKLIGARFFSKGHEASGTLFNDTVEFLSPRDADGHGTHTASTAAGRYVFEASMAGYASGVAKGVAPKARLAMYKVCWKNSGCYDSDILAAFDAAVNDGVDVISMSIGGGDGISSPYYLDPIAIGSYGAVSRGVFVSSSGGNDGPSGMSVTNLAPWLTTVAAGTIDRDFPAEVILGNGRRLSGVSLYSGVPLKGRMFPLIYPGKSGVLTDSLCMENSLDPELVKGKIVVCDRGSNPRVAKGLEVKKAGGVGMILANGISNGEGLVGDAHLLPACALGANLGDEVKAYISSSENPRATIEFKGTVVGIKPAPVVASFSARGPNALNLEILKPDLAAPGVNILAAWTNAVGPSGLESDTRRSEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTATVLDNTNREMVDQATGNGSTPYDFGAGHLNLAHAIDPGLIFDITNDDYVMFLCAIGYRPRVIQVITRSPPKCPRRRQSPENLNYPSFVAVLPASSSSRRLSLLSKTFFRTVTNVGEPNSVYWVLLEMEAEGLTVTVRPSRLVFSEAVKKRSFVVTVTGDAGNLVLGEAGAVFGSLSWTDGKHVVRSPMVVTQAQPL* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1852 772 Pfam Peptidase inhibitor I9 47 105 IPR010259 -
Vra5g1852 772 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Vra5g1852 772 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Vra5g1852 772 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Vra5g1852 772 SUPERFAMILY Subtilisin-like 104 615 IPR036852 GO:0004252|GO:0006508
Vra5g1852 772 SUPERFAMILY PA domain 397 470 IPR046450 -
Vra5g1852 772 CDD PA_subtilisin_like 347 472 - -
Vra5g1852 772 Gene3D Peptidase S8/S53 domain 130 624 IPR036852 GO:0004252|GO:0006508
Vra5g1852 772 ProSiteProfiles Serine proteases, subtilase domain profile. 101 611 - -
Vra5g1852 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 766 IPR045051 -
Vra5g1852 772 SUPERFAMILY Protease propeptides/inhibitors 33 104 - -
Vra5g1852 772 CDD Peptidases_S8_3 103 577 IPR034197 -
Vra5g1852 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 105 IPR037045 -
Vra5g1852 772 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 21 766 - -
Vra5g1852 772 Gene3D - 340 479 - -
Vra5g1852 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Vra5g1852 772 Pfam Fibronectin type-III domain 657 766 IPR041469 -
Vra5g1852 772 Pfam Subtilase family 128 594 IPR000209 GO:0006508|GO:0008236
Vra5g1852 772 Pfam PA domain 384 456 IPR003137 -
Vra5g1852 772 Gene3D - 628 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1852 Vra-Chr5 24369653 24372340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1852 8 772 Subtilisin-like Serine Gene Family AT4G34980 70.909 0.0 1139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1852 - - gmx:100792501 1313.13