Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1824 ATGGGTTTCGGCTTCATCGGGTTTCAAAGGCGTGTGAAAATTCCAAAGGGCAGTGTAGCAGTGTATGTAGGAGAAAACCAGAAGAAGCGTTTTGTGGTTCCCATATCATACTTGAACCAACCTTCTTTCCAAGAGTTGCTGAGTCAAGCTGAGCAAGAATTTGGATTTGATCATCCAATGGGTGGCCTCACACTTCCTTGCAGAGAAGATGTCTTCCTTCAAGTCACTTCTCGCTTGCACAGGCGATAG 249 0.4578 MGFGFIGFQRRVKIPKGSVAVYVGENQKKRFVVPISYLNQPSFQELLSQAEQEFGFDHPMGGLTLPCREDVFLQVTSRLHRR* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1824 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 79 IPR003676 GO:0009733
Vra5g1824 82 PANTHER - 13 79 - -
Vra5g1824 82 Pfam Auxin responsive protein 13 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1824 Vra-Chr5 24213776 24214302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1824 14 72 Calmodulin-binding Proteins AT5G20810 50.847 2.83e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1824 K14488 - gmx:106798359 142.895