Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1822 ATGGCTATTCGTGTGTCTTGTGTTTTGAGTGCAAAATACATTCTCCGTCGATCAAATCCGCCTGCAAATCATGCAGCTGCAACATCAGTGCATGTGCCTAAAGGGCACTTTGCTGTGTACGTAGGAGAGGGTAAAAAGAAGAGATTTGTGATACCAGTGTCAGTGTTGAATCAACCCTCATTTCAGCAATTGTTAAGCATAGCAGAGGAAGAATTTGGCTTCAGCCATCCAATGGGTGGACTTACGATTCCATGCACAGAAGACATTTTCCTTAACATCACCTCTGCTTTTCGTAGGCCATGA 303 0.4389 MAIRVSCVLSAKYILRRSNPPANHAAATSVHVPKGHFAVYVGEGKKKRFVIPVSVLNQPSFQQLLSIAEEEFGFSHPMGGLTIPCTEDIFLNITSAFRRP* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1822 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 27 97 IPR003676 GO:0009733
Vra5g1822 100 Pfam Auxin responsive protein 23 95 IPR003676 GO:0009733
Vra5g1822 100 PANTHER - 27 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1822 Vra-Chr5 24198713 24199063 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1822 32 99 Calmodulin-binding Proteins AT4G34750 47.059 2.86e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1822 K14488 - aprc:113865304 165.236