Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1820 ATGATGGCTATTCGTTTTCCAACTGCCTTCAGTGCCAAACACATCCTTCGCAGATCTAATCTGTTTGCGAATCAGGCACTCGATGTGCCTAAAGGGTACTTAGCTGTGTACGTAGGAGAGGGTGAAAAGAAGAGATTTGTGATACCAGTGTCAGTGTTGAATCAACCCTCGTTTCAAAAACTGTTGAGTATAGCAGAGGAAGAATTTGGGTTCAATCATCCAATGGGTGGCCTTACTATTCCATGCACACAAGATATCTTTGATAACATCACCTCTGGCTTACATAGGCTATGA 294 0.4286 MMAIRFPTAFSAKHILRRSNLFANQALDVPKGYLAVYVGEGEKKRFVIPVSVLNQPSFQKLLSIAEEEFGFNHPMGGLTIPCTQDIFDNITSGLHRL* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1820 97 Pfam Auxin responsive protein 20 92 IPR003676 GO:0009733
Vra5g1820 97 PANTHER - 4 95 - -
Vra5g1820 97 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 4 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1820 Vra-Chr5 24193798 24194375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1820 28 87 Calmodulin-binding Proteins AT3G43120 58.333 2.21e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1820 K14488 - aprc:113865304 165.236