Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1818 ATGGCCATCAGAAAATCAAACAAGACTTCTCAAACCACAGTCCTCAAGCAAATCCTCAAAAGATGTTCCAGCTTGGGAAAGAAGAACGACTACGACAATAACGATGATGCTCTTCCTCTCGATGTCCCCAAAGGCCATTTCGCTGTCTACGTCGGAGAAAACAGAAGTAGATACATTGTTCCCATCTCCTTTTTGACTCATCCTCAGTTTCAGTCCCTCCTTCGACAAGCTGAGGAAGAGTTTGGCTTCGATCACGATATGGGACTCACTATTCCCTGCCAAGAAGTTGTTTTCCGCTCTCTAACATCCACACTACGATGA 321 0.4517 MAIRKSNKTSQTTVLKQILKRCSSLGKKNDYDNNDDALPLDVPKGHFAVYVGENRSRYIVPISFLTHPQFQSLLRQAEEEFGFDHDMGLTIPCQEVVFRSLTSTLR* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1818 106 Pfam Auxin responsive protein 27 104 IPR003676 GO:0009733
Vra5g1818 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 106 IPR003676 GO:0009733
Vra5g1818 106 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1818 Vra-Chr5 24182103 24182876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1818 39 101 Calmodulin-binding Proteins AT3G43120 55.556 2.84e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1818 K14488 - gmx:100805634 190.66