Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1778 ATGGCTCCAAAGAAGGACAAGGCTCCCCCACCTTCATCAAAGCCCGCCAAGTCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAAAAGGTGAATAACATGGTGCTGTTTGATCAGGGTACCTATGACAAGCTCCTCTCCGAGGCACCAAAATACAAGCTTATTACTCCATCTATTCTCTCTGATCGTCTTAGGATTAATGGATCACTTGCAAGGAAGGCTATACGGGAATTGATGGCTAGAGGTTCAATAAGGATGGTGTCTGCCCATGCAAGTCAGCAGATTTACACTAGAGCTACAAACACCTAG 327 0.4679 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVSAHASQQIYTRATNT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1778 108 PANTHER 40S RIBOSOMAL PROTEIN S25 2 108 IPR004977 -
Vra5g1778 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Vra5g1778 108 PANTHER BNAA04G12260D PROTEIN 2 108 - -
Vra5g1778 108 MobiDBLite consensus disorder prediction 1 36 - -
Vra5g1778 108 Gene3D - 21 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1778 Vra-Chr5 23859236 23861103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1778 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.523 1.37e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1778 K02975 - gmx:100499810 162.155