Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra5g1719 | ATGAGTTGTTTTTCGTGCTTTGTTTCTCGCCGGAAAGATGTGAGGAGGGTTGAAATTGACAATGGCACTCGATCTGCTACTGCTGCTTCCTCGGAGGGTGAAAGGAAGAGAGAATCGTCAGAGGCAAAGGGGAAGAGTGTGAGTAGTGGTAAAGGAAGTACCGCAGCGGCTAGTTTTGGTTTCCGCGAACTCGCTGCGGCGACGAGGGGTTTCAAGGAAGTGAACTTAATTGGGGAAGGTGGTTTTGGAAGGGTTTACAAAGGTCGACTTTCAACGGGCGAGCTTGTTGCCGTGAAACAATTGAGCCATGATGGTCGACAAGGTTTTCAGGAATTCGTGACAGAGGTTCTTATGTTGAGCTTGCTGCACCATTCTAATCTTGTGAAGTTAATTGGCTACTGCACGGATGGAGATCAGAGGCTTTTGGTTTATGAGTACATGCCCATGGGTTCACTGGAAGATCATCTTTTTGATCCGACCCAAGACAAAGAACCTCTAAGTTGGAGTTCTCGAATGAAGATTGCTGTCGGAGCTGCTCGTGGCCTCGAGTATCTCCATTGTAAAGCAGATCCACCTGTTATTTACAGAGACTTGAAATCTGCTAACATCTTGTTAGATAATGAATTCAATCCAAAACTATCAGATTTTGGGCTTGCTAAACTTGGACCTGTTGGAGACAATACCCATGTTTCAACCAGAGTGATGGGAACATATGGCTACTGTGCACCTGAGTATGCCATGAGCGGCAAATTAACTCTTAAATCTGATATCTACAGCTTTGGTGTGGTTTTGTTGGAGTTGATCACTGGACGTAGAGCAATAGATACCAGTAGAAAGCCAGGAGAGCAAAACTTGGTTTCGTGGTCTCGTCCATATTTTAGTGACCGGAGAAAGTTTGTGCATATGGTTGACCCTCTTTTACAAGGCAACTTCCCCTTGCGGTGTTTGCATCAGGCAATTGCTATAACTGCCATGTGTCTCCAGGAGCAACCAAAATTCCGTCCACTTATTGGTGATATTGTAGTTGCACTGGAATACCTAGCTTCTCAGAGTATTACTGAAGTGCATAGACATGGTGGGCGCAGCTCACCGCAACAACCATCTTCGGAAATGGACAGAAATTAA | 1125 | 0.4533 | MSCFSCFVSRRKDVRRVEIDNGTRSATAASSEGERKRESSEAKGKSVSSGKGSTAAASFGFRELAAATRGFKEVNLIGEGGFGRVYKGRLSTGELVAVKQLSHDGRQGFQEFVTEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDPTQDKEPLSWSSRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDNEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDTSRKPGEQNLVSWSRPYFSDRRKFVHMVDPLLQGNFPLRCLHQAIAITAMCLQEQPKFRPLIGDIVVALEYLASQSITEVHRHGGRSSPQQPSSEMDRN* | 375 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra5g1719 | 374 | Pfam | Protein kinase domain | 71 | 336 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g1719 | 374 | SMART | serkin_6 | 71 | 347 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g1719 | 374 | PANTHER | OS07G0668900 PROTEIN | 1 | 366 | - | - | |
Vra5g1719 | 374 | MobiDBLite | consensus disorder prediction | 30 | 44 | - | - | |
Vra5g1719 | 374 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 193 | 205 | IPR008271 | GO:0004672|GO:0006468 | |
Vra5g1719 | 374 | Gene3D | Phosphorylase Kinase; domain 1 | 28 | 146 | - | - | |
Vra5g1719 | 374 | ProSitePatterns | Protein kinases ATP-binding region signature. | 77 | 99 | IPR017441 | GO:0005524 | |
Vra5g1719 | 374 | SUPERFAMILY | Protein kinase-like (PK-like) | 54 | 345 | IPR011009 | - | |
Vra5g1719 | 374 | ProSiteProfiles | Protein kinase domain profile. | 71 | 347 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g1719 | 374 | Gene3D | Transferase(Phosphotransferase) domain 1 | 147 | 362 | - | - | |
Vra5g1719 | 374 | MobiDBLite | consensus disorder prediction | 355 | 374 | - | - | |
Vra5g1719 | 374 | PANTHER | OS07G0668900 PROTEIN | 1 | 366 | - | - | |
Vra5g1719 | 374 | MobiDBLite | consensus disorder prediction | 19 | 53 | - | - | |
Vra5g1719 | 374 | CDD | STKc_IRAK | 77 | 345 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra5g1719 | Vra-Chr5 | 23464166 | 23468487 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra5g1719 | 1 | 370 | Glycoside Hydrolase | AT3G07070 | 58.639 | 5.85e-154 | 438 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Vra5g1719 | Pkinase | 6e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra5g1719 | - | - | gmx:100796595 | 605.134 |