Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1695 ATGACTTCTCTTTCTGCCCTAAATATCTCTCTGCAATATCCTCCTGCTCGCAGAGACGACACCGTCGTTGAAGATTACCATGGCGTCAAAATTGCCGATCCTTACCGATGGCTCGAAGATCCTGATGCGGAAGAAGTGAAAGAGTTCGTACAGGAACAGGTTAAACTGACGGATTCGGTTCTTCAAAAATGCGAAACGAGAGACAAGCTCAGGGAAGGGATAACGAAGCTTTTTGACCATCCTCGTTACGGCACGCCGTTTAGACGAGCGGATAAGTACTTCTACTACCACAACACTGGGCTTCAACCACAAGATATCCTTTATGTGCAGGAGAGTTTGGAGGGAGAGGCAGAGGTGTTACTCGATCCCAATGGCTTCAGCGAAGACGGAACTGTGTCGCTGAGTACTCTGTCAGTAAGTGAAGATGGCAAATACTTGGCTTATGCGCTTAGTTCAAGCGGTAGCGATTGGACGACTATAAAAGTGCTGCGGATTGACGATAGAAATGTTGAGCCCGATACTTTACTGTGGGTAAAGTTCTCCTCAATTAGTTGGACGCATGACAACAAAGGTTTCTTTTATAGCCGCTATCCAGCACCAAAAGATAGAGAAGTAGAACATGCTGGGACTGAAACAAATGCTAACCTTCATCATCAGCTCTATTACCATTTTCTGGGTACAGATCAATCAGAAGATATTTTGTGCTGGAGAGATCCTGAAAACCCCAAATATTCGTTTGGAGGAGGTGTTACTGATGATGGCCAGTATATTCTTCTCCATATTTCAGAAGGGTGCGATCCAGTCAATAAACTTTACTACTGTGACTTATCCAAAATTCCTAATGGGCTGGAAAGCTTTCGGAATGGAAATTCCCTCCTCCCATTTGTCAAACTTATTGATAACTTTGATGCACAGTATGAAGCCATTGCGAATGATGATACTGTGTTTACATTTTTAACTAATAAAGATGCTCCAAAATATAAATTAGTCCGAGTGGATTTGAAAGAACCAACTACTTGGATTGATGTCGTCCAAGAGTCAGAAAAAGATGTACTTGAGTCAGCATGTGCTGTAAACGGTAACCAACTGATAGTGAGTTACTTGAGTGATGTAAAGTATGTTCTGCAAGTTAGAGACTTAAAAACAGGTTCCTTTCTGCACCAATTACCAATTGACATTGGCTCAGTTTCTGAAGTTTCTGGGCGGCGTGAAGATAGTGTGATTTTCATTAGCTTTACAAGTTTTTTAACTCCTGGTATCATCTACCAGTGTAACTTGGGAACAGAGATTCCTGATATGAGGATATTTCGTGAAATCGTTGTCCCAGGGTTTGACCGATCAGAATTTCATGTTAAACAGGATTTCGTGAGTAGTAAAGACGCTACCAAAATCCCAGTGTTCATTGTTGCGAAAAAGGATATTATTTTGGATGGTTCACATCCATGTTTATTATACGGATATGGCGGTTTTAACATTAGCATTACACCATATTTCAGTGTCAGTCGCATTGTAATCACAAGACATTTAGGTGTTGTTTTCTGCATAGCAAATATTCGTGGTGGTGGAGAATATGGGGAGGAATGGCACAAAGCAGGCTCGCTTGCAAGGAAGCAGAATTGCTTTGATGACTTTATTTCCGCAGCAGAATACCTTGTATCTACGGGTTATACTCAACCCAAAAAGTTATGTATTGAAGGTGGAAGCAATGGTGGACTTCTTGTTGGTGCTTGTATAAATCAGAGACCTGATTTATTTGGTTGCGCTCTAGCTCATGTTGGTGTTATGGACATGCTACGGTTCCACAAATTTACCATAGGTCATGCGTGGACCTCAGATTATGGTTGTTCAGAAAAGGAGGAAGAGTTTCATTGGCTAATCAAATACTCTCCACTGCATAATGTGAGGAGACCATGGGAACAGCATACTGATCAGTCTATTCAGTATCCATCAACCATGCTGTTGACAGCTGATCATGATGATCGTGTTGTGCCACTGCACACATTGAAGTTATTAGCGACCATGCAGCATGTCCTCTGTACTAGTTTGGAACAAAGTCTCCAGACAAACCCTATAATTGGTCGCATTGACTGCAAGTCTGGACATGGTGCTGGACGTCCAACACAGAAAATGATTGATGAAGCTGCTGACCGGTACAGTTTTATGGCTAAAATGTTAGAAGCACATTGGATTGAATAG 2196 0.4189 MTSLSALNISLQYPPARRDDTVVEDYHGVKIADPYRWLEDPDAEEVKEFVQEQVKLTDSVLQKCETRDKLREGITKLFDHPRYGTPFRRADKYFYYHNTGLQPQDILYVQESLEGEAEVLLDPNGFSEDGTVSLSTLSVSEDGKYLAYALSSSGSDWTTIKVLRIDDRNVEPDTLLWVKFSSISWTHDNKGFFYSRYPAPKDREVEHAGTETNANLHHQLYYHFLGTDQSEDILCWRDPENPKYSFGGGVTDDGQYILLHISEGCDPVNKLYYCDLSKIPNGLESFRNGNSLLPFVKLIDNFDAQYEAIANDDTVFTFLTNKDAPKYKLVRVDLKEPTTWIDVVQESEKDVLESACAVNGNQLIVSYLSDVKYVLQVRDLKTGSFLHQLPIDIGSVSEVSGRREDSVIFISFTSFLTPGIIYQCNLGTEIPDMRIFREIVVPGFDRSEFHVKQDFVSSKDATKIPVFIVAKKDIILDGSHPCLLYGYGGFNISITPYFSVSRIVITRHLGVVFCIANIRGGGEYGEEWHKAGSLARKQNCFDDFISAAEYLVSTGYTQPKKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCSEKEEEFHWLIKYSPLHNVRRPWEQHTDQSIQYPSTMLLTADHDDRVVPLHTLKLLATMQHVLCTSLEQSLQTNPIIGRIDCKSGHGAGRPTQKMIDEAADRYSFMAKMLEAHWIE* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1695 731 SUPERFAMILY alpha/beta-Hydrolases 452 676 IPR029058 -
Vra5g1695 731 Gene3D - 81 440 - -
Vra5g1695 731 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 14 429 IPR023302 GO:0004252
Vra5g1695 731 ProSitePatterns Prolyl endopeptidase family serine active site. 543 573 IPR002471 GO:0004252|GO:0006508
Vra5g1695 731 Pfam Prolyl oligopeptidase family 496 726 IPR001375 GO:0006508|GO:0008236
Vra5g1695 731 PANTHER PROLYL ENDOPEPTIDASE 1 731 - -
Vra5g1695 731 PANTHER PROLYL OLIGOPEPTIDASE-LIKE PROTEIN 1 731 - -
Vra5g1695 731 Gene3D alpha/beta hydrolase 22 721 IPR029058 -
Vra5g1695 731 SUPERFAMILY Peptidase/esterase 'gauge' domain 10 428 - -
Vra5g1695 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 481 499 IPR002470 GO:0004252|GO:0006508
Vra5g1695 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 508 532 IPR002470 GO:0004252|GO:0006508
Vra5g1695 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 536 555 IPR002470 GO:0004252|GO:0006508
Vra5g1695 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 566 586 IPR002470 GO:0004252|GO:0006508
Vra5g1695 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 648 670 IPR002470 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1695 Vra-Chr5 23260792 23267021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1695 510 613 Carbohydrate Esterase AT5G36210 34.906 3.15e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1695 K01322 - gmx:100776544 1380.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1695 5 23260792 23267021 Vra5g1695 5 23260792 23267021 ECH
Vra6g1996 6 36648727 36653071 Vra5g1695 5 23260792 23267021 PCT