Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1674 ATGGCGTCGGCGTCAGCGTGTAACTGTTGCAGAAGGAAGCATGTCTCAAATTCACCATCGCCACCTCCAACTCCAACTTCATCTCTTCCACAAATTCTTCTTCCTCCTTCTTCTTCTTCTTATTCTTCTACTCGCATCATCACCCTTCACCAGTTTTTGCCCCTTCATTCATCATCGCTTTCCGAAACTGAACAGATCTTGAAATCCAAAGCATGCACTTCTCACTCTGCACACTCCGATGAACGGTTTAAGCGCCTCATCAAGAGCCGAGACTGTGCTGCTCGATCAAGAGCCAAACAACAGGCTTATCAAAACCAGTTGGAAACTAAACTTGCCCTTTTAATACAAGAAAATTCCACACTCAGAAGCCAGATAGAAGAGATGAAAATTCGATTGAAATGTGGTGGTGCACCGAAAAAGCACAGTCTCTACAGAACCTCAACTTCTCCATTTTGA 456 0.443 MASASACNCCRRKHVSNSPSPPPTPTSSLPQILLPPSSSSYSSTRIITLHQFLPLHSSSLSETEQILKSKACTSHSAHSDERFKRLIKSRDCAARSRAKQQAYQNQLETKLALLIQENSTLRSQIEEMKIRLKCGGAPKKHSLYRTSTSPF* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1674 151 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 151 IPR043452 GO:0003700|GO:0045893
Vra5g1674 151 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 79 129 IPR004827 GO:0003700|GO:0006355
Vra5g1674 151 Pfam bZIP transcription factor 82 129 IPR004827 GO:0003700|GO:0006355
Vra5g1674 151 SMART brlzneu 77 141 IPR004827 GO:0003700|GO:0006355
Vra5g1674 151 Gene3D - 81 133 - -
Vra5g1674 151 PANTHER PROTEIN FD-LIKE 18 151 - -
Vra5g1674 151 SUPERFAMILY Leucine zipper domain 82 129 IPR046347 GO:0003700|GO:0006355
Vra5g1674 151 Coils Coil 104 131 - -
Vra5g1674 151 MobiDBLite consensus disorder prediction 1 17 - -
Vra5g1674 151 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1674 Vra-Chr5 23096405 23098352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1674 80 151 bZIP Transcription Factor Family AT3G56850 47.222 9.71e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra5g1674 bZIP_1 2.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1674 K14432 - var:108342572 217.238