Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1673 ATGCTACCAACCGCGCATGCTCCCATTGGTTCCTGCAATCTACGAGAGCATAGGAACATGAAAGCCAACACAATTTTCTTGCTATTATTCCATGTTCATTTGGTGTTTCTTGGAGAATCATCATCATCATCATCATCTGCAGAAGCAGGGAATGGAAGTGACAACCAGACTAACCGTGAAGTTTATATCGTGTATATGGGAGCCGTCAAAGATTCTGTTCGGGATGATCATGCTTATCTTCTGAATTCAGTGCTAGCGAGGAACAAGAATGCTCTGGTTCGCAAATACAGGCATGGTTTTTCTGGGCTTGCTGTTCGTTTAACTGAAGAGGAGGCAAACTCAATTGCTCATAGACCTGGTGTGATCTCTGTCTTCCGGGATCCAATTCTGAAGCTCCACACAACCCGTTCTTGGGATTTCCTTAAGGACCAAAGCCCACCACCCAAAACCCACAGCCCAAACAGGGCCTCCAATGCTGCTCCCTCATCAGACGTCGTCATTGGCATTTTGGACTCAGGTATATGGCCAGAGTCAGCAAGCTTTAGCGACAAGGGAATGGGTCCCGTTCCATCCCGTTGGAAAGGCACTTGTATGAACTCCTTTAACTTCAATTCATCAAACTGTAACAGGAAGATAATTGGAGCAAGGTATTACCGTGACCCTAATGGAGACAAAGAGTTTGAGACACCAAGGGATGTAGACGGCCACGGAACCCACGTAGCAGCCACAGCGGCGGGAGTCACCGTGCCCGGTGTCTCATACTACGGAGTGGCGGCGGGGACTGCCCAGGGTGGGTCCCCGGAATCACGGTTGGCGATTTACCAAGTGTGCTTCAAGAACGAATGCCCTGGCTCGGTGATTCTTGCGGCGTTTGACGATGCCATTGCTGATGGGGTCGATGTGATTTCGCTGTCGATTGGTTCCACCCCTGGGTTACGATCCGAGTTGAAACACGACCCAATCGCCATCGGGGCATTCCACGCCGTGGAGCGCGGCATTTTGGTGGTTGCCTCCGCGGGAAACGGCGGACCAAACTTAAACACGGTGGTGAATGACGCACCTTGGATTTTTAGCGTTGCTGCCTCTTCGATAGACAGGGATTTTAAGTCCAACCTTGCCTTTGGTGATAACAAAGTCATCAAGGGTGAAGGTCTTAATTTCTCCCCCCTTTCAAATTTACCAAAATATCCACTTGTATATGGTGAGTCTGCCAAGGCAAAGAAAGCCAGGTCAGATGACGCAAGGCAATGCTTCCCAGGTTCATTCGCTAAACGTCTAGTAAAAGGGAAGATTGTCATATGTGACGATAAAGATCATTCATATAGAACTAGTTTGAAAGTTGATGCTGTGCGGGAGGTAAGTGGAGTAGGTGTGGTTCACATTTCTGACCCAATAGTAGGAGCAGAAAGAGAAGATTTTGGAGACTTCCCAGCTACAGAGATCACTTCTAAAGACGCTGACGTAATCTTTCAGTATGTTAATTCAACCAGCAATCCAGTGGCAACAATTCTCCCAACAGTTTCAATCCTTGATTTTAAGCCTGCACCCATCATCCCATCCTTTTCAGCAAGAGGGCCTTCAGACCTTTCCAAGAATATTCTCAAGCCTGATATTGCAGCACCGGGGGTTAACATTCTTGCAGCATGGATTGGAAATCACAGAGAAGGCGTTCCTAAACATAAAAAGCCCTCACAGTTCAATATCCTATCGGGTACTTCTATGGCATGTCCACATGTTTCAGGACTTGCAGCTACCATCAAATCTCAAAACCCCACTTGGAGTGCCTCTGCAATCAAATCCGCAATTATGACCACTGCAACTCAAAAGAACAATTTGAAGGCTCCCATAAGAACGGAGACAGGATCAACAGCCACACCTTATGACTATGGAGCAGGGCAAATGACACTGTATGGACCATTCCACCCAGGGCTGGTTTATGAAACCAACACAGTTGACTACTTGAACTACTTATGTTATATTGGACATAATATAACCATGGTTAAGATTATATCCAGATCTGTTCCTAATAATTTCAGCTGCCCCAAAGATTCTAGTTCTCATCATGTATCCAACATCAACTATCCTTCCATAGCAATCTCCGACCTCGAAGGGAAAAAAGTTGTACAAGTTACTAGAACTGTTACAAATGTTGGTGAAGAGAACGAAACAATTTACTCTCCTGTTATCGATGCTCCTACAGGGATAAAGGTCAACTTGATTCCAAATAAACTTCAATTTACGAAAAATAGTAGAAAACTAAGCTACCAAGTTATCTTTTCATTCACGTCGACCATGTCGATGGACCATTTATTTGGATCAATTACTTGGAGTAATGGTAAATATTCTGTTCGAAGTCCATTTGTATTAACTAAGAGCTAA 2379 0.4527 MLPTAHAPIGSCNLREHRNMKANTIFLLLFHVHLVFLGESSSSSSSAEAGNGSDNQTNREVYIVYMGAVKDSVRDDHAYLLNSVLARNKNALVRKYRHGFSGLAVRLTEEEANSIAHRPGVISVFRDPILKLHTTRSWDFLKDQSPPPKTHSPNRASNAAPSSDVVIGILDSGIWPESASFSDKGMGPVPSRWKGTCMNSFNFNSSNCNRKIIGARYYRDPNGDKEFETPRDVDGHGTHVAATAAGVTVPGVSYYGVAAGTAQGGSPESRLAIYQVCFKNECPGSVILAAFDDAIADGVDVISLSIGSTPGLRSELKHDPIAIGAFHAVERGILVVASAGNGGPNLNTVVNDAPWIFSVAASSIDRDFKSNLAFGDNKVIKGEGLNFSPLSNLPKYPLVYGESAKAKKARSDDARQCFPGSFAKRLVKGKIVICDDKDHSYRTSLKVDAVREVSGVGVVHISDPIVGAEREDFGDFPATEITSKDADVIFQYVNSTSNPVATILPTVSILDFKPAPIIPSFSARGPSDLSKNILKPDIAAPGVNILAAWIGNHREGVPKHKKPSQFNILSGTSMACPHVSGLAATIKSQNPTWSASAIKSAIMTTATQKNNLKAPIRTETGSTATPYDYGAGQMTLYGPFHPGLVYETNTVDYLNYLCYIGHNITMVKIISRSVPNNFSCPKDSSSHHVSNINYPSIAISDLEGKKVVQVTRTVTNVGEENETIYSPVIDAPTGIKVNLIPNKLQFTKNSRKLSYQVIFSFTSTMSMDHLFGSITWSNGKYSVRSPFVLTKS* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1673 792 Gene3D - 657 791 - -
Vra5g1673 792 ProSiteProfiles Serine proteases, subtilase domain profile. 137 640 - -
Vra5g1673 792 PRINTS Subtilisin serine protease family (S8) signature 162 181 IPR015500 -
Vra5g1673 792 PRINTS Subtilisin serine protease family (S8) signature 232 245 IPR015500 -
Vra5g1673 792 PRINTS Subtilisin serine protease family (S8) signature 570 586 IPR015500 -
Vra5g1673 792 PANTHER CO(2)-RESPONSE SECRETED PROTEASE 78 790 - -
Vra5g1673 792 SUPERFAMILY Subtilisin-like 59 682 IPR036852 GO:0004252|GO:0006508
Vra5g1673 792 Pfam Peptidase inhibitor I9 61 133 IPR010259 -
Vra5g1673 792 ProSitePatterns Serine proteases, subtilase family, serine active site. 571 581 IPR023828 -
Vra5g1673 792 CDD PA_subtilisin_like 375 503 - -
Vra5g1673 792 Gene3D Peptidase S8/S53 domain 164 653 IPR036852 GO:0004252|GO:0006508
Vra5g1673 792 Gene3D - 365 510 - -
Vra5g1673 792 Pfam Fibronectin type-III domain 691 788 IPR041469 -
Vra5g1673 792 Pfam Subtilase family 162 618 IPR000209 GO:0006508|GO:0008236
Vra5g1673 792 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 39 133 IPR037045 -
Vra5g1673 792 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 78 790 IPR045051 -
Vra5g1673 792 MobiDBLite consensus disorder prediction 140 160 - -
Vra5g1673 792 CDD Peptidases_S8_3 130 607 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1673 Vra-Chr5 23089217 23092562 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1673 62 790 Subtilisin-like Serine Gene Family AT1G20150 51.682 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1673 K25898 - vra:106760858 1533.08