Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1672 ATGCCTTTATATACCATAACTTGCAAGAGTGCTTCAACTAAGTCACAACTGACTAACATGCAAGGCAATAAACTTTTGTTGCATATATTCACTCTTTTTGTGTTTCTTGGAGCCACAAGTTCATCACCAGAAAATGGCAGCAACAGTAAACAAGTTTATATCGTCTATATGGGAGCTGCGGATTCTTCCAATGCTTCTCTTCGGAATGACCATGCTCAGCTTCTCAATGCAGTGCTAAGAAGGAATGACAAGGCTTTGGTGCGGAACTACAAGCATGGTTTCTCAGGGTTCGCAGCTCGTTTATCAAAAGAGGAGGCAAATTCAATTGCTCAGAAACCTGGTGTTGTGTCTGTTTTTCCTGACCCCATTCTGAAGCTCCACACAACTCGTTCCTGGGATTTCCTAAAATACCAAACTCACGTCAAAATCGATGCCAACCCAAAAACGCTCTCCAATTCGTCTTCCTCCTCAGACGTTATCCTTGGCATATTAGACACAGGTATATGGCCAGAGGCGGCGAGTTTTAGTGAGGAGGGAATGGGTCCTGTTCCATCACGTTGGAAAGGCACGTGCGTGAAATCATCAGACTTTAATGCATCTAATTGCAACAGGAAACTAATTGGGGCAAGATTTTACACTGACCCTAATGGGGAAGACGACGACAACACGCCACGGGACTCGCTTGGCCACGGGACCCATGTGGCCTCCACGGCGGTGGGAGCCGCCGTGACTAACGCATCGTACTACGGTCTGGCGGCGGGGAGCGCCAAGGGTGGGTCCCCAGAATCAAGATTGGCGGTTTACAGAGTGTGTTCTAATTTTGGGTGCAGTGGGTCCGCCATTCTCGGGGCGTTTGACGATGCCATTGCCGACGGAGTCGATGTTCTGTCGCTGTCGCTCGGTGCATCACCCGGATTTCGACCCGACTTGACGAACGACCCGATTGCAATCGGAGCGTTCCACGCCGTGGAGCGCGGCATCGTGGTGGCCTGCTCCGCTGGGAACGATGGACCGAGCTCGAACACGGTTGTGAACGATGCGCCTTGGATTTTAACCGTTGCAGCTTCCACCATCGACCGAGATTTTCAGTCCAACGTGGTCTTGGGTGGTAACAAAACCATCAAAGGTAGGGCTATAAATTTCTCCCCTCTTTCAAATTCGGCTCAGTATCCATTGGTATACGGCGAGTCTTCCAAGACGAACGAGAGTAGTTTAACTGAAGCAAGACAATGTCACCCCGATTCATTAGATGCAAGCAAAGTCAAAGGGAAGATTGTGCTATGTGATGGCAGAAATGATGAATACTCAACTATTGAAATAATAGACACAGTGAAAACCCTGGGAGGAATAGGCCTAGTTCATATTACGGACTCAAATGGAGCAATAGCTTCATATTACGGGGACTTCCCTGCAACCGTTATAAGCTCAAAAGATGGTGCCACAATACTGCAATACATCAATTCATCCAACAATCCAGCAGCAACAATTCTCCCAACAACTACAGTTCTTGATTATAAACCTGCTCCCCTTGTGCCAGACTTTTCATCAAGAGGACCTTCAACTCTATCAAGCAATATTCTAAAGCCTGATATTGCAGCACCAGGAGTTAATATTCTGGCCGCATGGATTGAAAGTAGCTCAGACGAAGTTCCCAAAGGAAGAAAGCCCTCACAGTACAACATAATCTCTGGGACTTCCATGGCCTGTCCACATGTTTCAGGACTTGCTAGCACTGTCAAAGCACGCAACCCCACTTGGGGTCCCTCTGCAATCAAATCTGCCATCATGACTTCAGCAATTCAAAGTGATAACACGAAGACAGCTATAACAACCGATTCAGGGTCAGTAGCCACACCTTATGACTATGGAGCAGGGGAGATGACAACATCTGAATCATTGCAACCAGGGCTAATTTATGAAACCGACACTATCGACTACTTAAACTTCTTGTGTTACATTGGACTTGACATAGCCACGGTTAAGGTCATCTCCAGAACTGTTCCTGACAATTTCAGTTGCCCCAAGGATTCAAGTTCTGATCTTGTCTCCAACATCAACTACCCTTCCATAGCAGTAAACTTCACTGGCAAAGGAACTGTCAGTGTGAGTAGAACTGTCACAAATGTTGGTGAAGAAGATGAAACAGTATACTCCCCAGTGGTTGAGGCTCCCAGTGGAGTAAAAGTCACATTAACTCCAGATAAATTACAATTTACGAAAACTAGTAAAAAACTAAGTTACAAAGTTATTTTCTCCACAACTTTGACTTCCCTCAAGGAAGATCTGTTTGGATCTATCACTTGGAGTAACGCCAGATATATGGTTCGAAGTCCTTTTGTATTAACTAAGTAA 2352 0.46 MPLYTITCKSASTKSQLTNMQGNKLLLHIFTLFVFLGATSSSPENGSNSKQVYIVYMGAADSSNASLRNDHAQLLNAVLRRNDKALVRNYKHGFSGFAARLSKEEANSIAQKPGVVSVFPDPILKLHTTRSWDFLKYQTHVKIDANPKTLSNSSSSSDVILGILDTGIWPEAASFSEEGMGPVPSRWKGTCVKSSDFNASNCNRKLIGARFYTDPNGEDDDNTPRDSLGHGTHVASTAVGAAVTNASYYGLAAGSAKGGSPESRLAVYRVCSNFGCSGSAILGAFDDAIADGVDVLSLSLGASPGFRPDLTNDPIAIGAFHAVERGIVVACSAGNDGPSSNTVVNDAPWILTVAASTIDRDFQSNVVLGGNKTIKGRAINFSPLSNSAQYPLVYGESSKTNESSLTEARQCHPDSLDASKVKGKIVLCDGRNDEYSTIEIIDTVKTLGGIGLVHITDSNGAIASYYGDFPATVISSKDGATILQYINSSNNPAATILPTTTVLDYKPAPLVPDFSSRGPSTLSSNILKPDIAAPGVNILAAWIESSSDEVPKGRKPSQYNIISGTSMACPHVSGLASTVKARNPTWGPSAIKSAIMTSAIQSDNTKTAITTDSGSVATPYDYGAGEMTTSESLQPGLIYETDTIDYLNFLCYIGLDIATVKVISRTVPDNFSCPKDSSSDLVSNINYPSIAVNFTGKGTVSVSRTVTNVGEEDETVYSPVVEAPSGVKVTLTPDKLQFTKTSKKLSYKVIFSTTLTSLKEDLFGSITWSNARYMVRSPFVLTK* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1672 783 CDD Peptidases_S8_3 124 600 IPR034197 -
Vra5g1672 783 Gene3D Peptidase S8/S53 domain 158 646 IPR036852 GO:0004252|GO:0006508
Vra5g1672 783 Gene3D - 359 503 - -
Vra5g1672 783 CDD PA_subtilisin_like 365 496 - -
Vra5g1672 783 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 36 127 IPR037045 -
Vra5g1672 783 SUPERFAMILY Subtilisin-like 50 746 IPR036852 GO:0004252|GO:0006508
Vra5g1672 783 ProSitePatterns Serine proteases, subtilase family, histidine active site. 230 240 IPR022398 -
Vra5g1672 783 Pfam Subtilase family 156 625 IPR000209 GO:0006508|GO:0008236
Vra5g1672 783 Gene3D - 650 783 - -
Vra5g1672 783 PRINTS Subtilisin serine protease family (S8) signature 156 175 IPR015500 -
Vra5g1672 783 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Vra5g1672 783 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Vra5g1672 783 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 39 781 - -
Vra5g1672 783 ProSiteProfiles Serine proteases, subtilase domain profile. 131 634 - -
Vra5g1672 783 Pfam Fibronectin type-III domain 684 780 IPR041469 -
Vra5g1672 783 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 39 781 IPR045051 -
Vra5g1672 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Vra5g1672 783 Pfam Peptidase inhibitor I9 52 127 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1672 Vra-Chr5 23079980 23083432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1672 53 782 Subtilisin-like Serine Gene Family AT1G20150 53.763 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1672 K25898 - gmx:100820194 1290.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1672 5 23079980 23083432 Vra5g1672 5 23079980 23083432 ECH