LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra5g1671	ATGAAAGGGAAGACGTTTTTGTTGCATTTATTCTGCATTCTGTTGCTGTTTTTTGGGGCGTCAAGTTCATCAGAAAGGCATGGTAATAACGATGGTGCCAACGCTAAACAGGTTTATATCGTCTATATGGGAGCTGCGGATTCAACAAATGGTTCTGTTCGGAACGACCATGCTCAGATTCTTAATTCAGTGCTAAGGAGGGATGGGAATGCTCTGGTACGAAACTACAAGCATGGTTTCTCAGGGTTTGCAGCTCGTTTATCAAAAGAGGAGGCAGATTCGATTGCTCAGAAACCTGGTGTTGTGTCTGTTTTTCCTGACCCCATTCTTCAGCTCCACACAACACGTTCCTGGGATTTTCTCGCACACCAAACACGTGTCAAAGTTGACACCAAACCAAACACGATCTCCGGTGTTTCTTCTTCCTCAGACGTTATCGTTGGCATATTAGACACAGGTGTATGGCCAGAGGCTGAGAGCTTTAGCGGCGAGGGATTGGGTCCGATTCCGTCCCGTTGGAAAGGCAAGTGCGTGCCATCACATGACTTCAATTCCTCCCGCTGCAACAGGAAGCTAATCGGGGCGAGGTCTTATGCTGTTTCTGGTGTCCAAGACTCGCCAAGGGATGAAAACGGCCATGGGACCCACACGGCGTCGACGGCGGTGGGTTCCTTCGTGAAAAACGCGTCGTTCTATGGTCTGGCGGCGGGGAACGCAAAGGGTGGGTCCCCAGAATCTAGGTTGGCGATTTACAAAGTGTGTTATCAAGGGGGATGTAGTGGGTCGGCCATTATGGCGGCGTTTGACGATGCCATTGCCGACGGAGTGGATGTGCTGTCGCTGTCGCTGGGTGGTAACTTCGGGGGGGACATAAAAGACTTGCTCAATGATTCCATCGCCATCGGAGCATTCCACGCCGTGGAACGTGGCATCCTGGTGGTCTGCTCCGCCGGAAATTCGGGACCGGATTCGTACACGGTTGTGAACGACGCGCCTTGGATTTTTACGGTTGCAGCCTCTACCATCGACCGGGATTTCGAATCCGACCTCGTGTTGGGTGATAACAAAACCATCAAGGGTAGAGCTATAAATTTCTCTCCACTCTCAAGTTCTCCCAAGTATCCAATCATATCTGGTGAGCTTGCCAAATCAAAAAAGAGCACCTTAGCTGACGCCAGAGTATGCACGTCAGGTTCATTAGATGGAAAAAAAGTAAAAGGGAAAATAGTGGTTTGTGATGGTTCGGAAGACGATATCCCACCAAAGGACAAAGGTTCGAGAATTAAAAAATTGGGAGGAATAGGTCTGGTTATGGTTACCGATGTATATGGGTCAGAAGCACCTATTTATGCTGACATCCCAGTAACGGTGATATATCCAAGATATCGCAAATCAATCTACAACTATATCACATCAACCAGCAAACCAGTGGCAACAATTCTAAGCACAAGAACAGTTCTTGGTTATAAACCTGCTCCTACGGTGCCAGATTTTTCATCAAGAGGACCTTCCAGCCTTTCAAGCAATATTCTCAAGCCTGATATTGCAGCACCAGGAGTAAATATTTTCGCTGCATGGAGTAAAAATGGCATAGAGAATGTTCCGAAAGGAAGACAGCCCTCACCTTACAACATAATCTCAGGGACTTCCATGTCCTGTCCACATGTTTCAGGGCTTGCAGCCTCTGTTAAAACACACAACCCCACTTGGAGTCCCTCTGCAATCAAATCTGCCATAATGACTTCAGCAATTCAAAACGACAACCTCAAGAGTCCCATAAGAAATGATTCGGGAGTGTTAGCCACACCTTATGACTATGGGGCAGGGGAAATAACAACATCTGAACCATTAAATCCAGGGCTGGTTTACGAAACCAACACCGTGGACTACTTGAACTTTTTGTGTTACGGTGGATTAAACATGAGCACGATTAAGATCATCTCCAGATCTGTTCCTCACAATTTCAGTTGTCCTAAGGATTCGAGTTTTGATCTCATCTCCAACATCAACTACCCTTCCATTGCAGTAAATCTCACTGGAAAACGAAATGTGAGCGTCATTAGAACTGCCACAAATGTTGGTGAACTAGCTGAAACAGTGTACTCTCCCACTGTGCATGCTCCAAGTAATGTTATTGTCACTGTAACTCCAGATAAACTCCACTTTACAAAGAGTAGTAAAAAACTAAGCTACAAAGTTATTTTCTCAGCTTTGAAATCCTTAGAGAACGACTTGTTTGGATCCATTACTTGGACCAACGACAAACATACAGTTCGAATTCCTTTTGTATTAACAAAATAG	2301	0.4589	MKGKTFLLHLFCILLLFFGASSSSERHGNNDGANAKQVYIVYMGAADSTNGSVRNDHAQILNSVLRRDGNALVRNYKHGFSGFAARLSKEEADSIAQKPGVVSVFPDPILQLHTTRSWDFLAHQTRVKVDTKPNTISGVSSSSDVIVGILDTGVWPEAESFSGEGLGPIPSRWKGKCVPSHDFNSSRCNRKLIGARSYAVSGVQDSPRDENGHGTHTASTAVGSFVKNASFYGLAAGNAKGGSPESRLAIYKVCYQGGCSGSAIMAAFDDAIADGVDVLSLSLGGNFGGDIKDLLNDSIAIGAFHAVERGILVVCSAGNSGPDSYTVVNDAPWIFTVAASTIDRDFESDLVLGDNKTIKGRAINFSPLSSSPKYPIISGELAKSKKSTLADARVCTSGSLDGKKVKGKIVVCDGSEDDIPPKDKGSRIKKLGGIGLVMVTDVYGSEAPIYADIPVTVIYPRYRKSIYNYITSTSKPVATILSTRTVLGYKPAPTVPDFSSRGPSSLSSNILKPDIAAPGVNIFAAWSKNGIENVPKGRQPSPYNIISGTSMSCPHVSGLAASVKTHNPTWSPSAIKSAIMTSAIQNDNLKSPIRNDSGVLATPYDYGAGEITTSEPLNPGLVYETNTVDYLNFLCYGGLNMSTIKIISRSVPHNFSCPKDSSFDLISNINYPSIAVNLTGKRNVSVIRTATNVGELAETVYSPTVHAPSNVIVTVTPDKLHFTKSSKKLSYKVIFSALKSLENDLFGSITWTNDKHTVRIPFVLTK*	767

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra5g1671	766	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	27	764	IPR045051	-
	Vra5g1671	766	Pfam	Subtilase family	142	607	IPR000209	GO:0006508\|GO:0008236
	Vra5g1671	766	PRINTS	Subtilisin serine protease family (S8) signature	142	161	IPR015500	-
	Vra5g1671	766	PRINTS	Subtilisin serine protease family (S8) signature	209	222	IPR015500	-
	Vra5g1671	766	PRINTS	Subtilisin serine protease family (S8) signature	547	563	IPR015500	-
	Vra5g1671	766	PANTHER	SUBTILISIN-LIKE PROTEASE SBT5.1	27	764	-	-
	Vra5g1671	766	Gene3D	Peptidase S8/S53 domain	144	630	IPR036852	GO:0004252\|GO:0006508
	Vra5g1671	766	Gene3D	-	343	487	-	-
	Vra5g1671	766	ProSiteProfiles	Serine proteases, subtilase domain profile.	117	617	-	-
	Vra5g1671	766	ProSitePatterns	Serine proteases, subtilase family, serine active site.	548	558	IPR023828	-
	Vra5g1671	766	CDD	PA_subtilisin_like	349	480	-	-
	Vra5g1671	766	SUPERFAMILY	Subtilisin-like	142	612	IPR036852	GO:0004252\|GO:0006508
	Vra5g1671	766	Gene3D	-	634	766	-	-
	Vra5g1671	766	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	20	113	IPR037045	-
	Vra5g1671	766	Pfam	Fibronectin type-III domain	668	763	IPR041469	-
	Vra5g1671	766	CDD	Peptidases_S8_3	110	584	IPR034197	-
	Vra5g1671	766	Pfam	Peptidase inhibitor I9	38	113	IPR010259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra5g1671	Vra-Chr5	23072736	23076572	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra5g1671	39	765	Subtilisin-like Serine Gene Family	AT1G20150	51.544	0.0	726

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra5g1671	K25898		-	gmx:100820194	1064.68