Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1621 ATGGATCTGCTACAGTCAGAGCCTATGCAAATAGTTCGATTGCTCATTCCAATCGAATCAGCTTATCGATCCATCTCTTACCTCGGCGATCTCAGCCTTTTCCAATTCAAAGACATTAAAAGATGTGAGGAAATGGCGCGTAGGCTGCGGTTTTTTAAGGAACAAATGACGAAAGCAGGTGTATCACCCTCAACGTGGCCAGCAGTTAAACTTGAAGAACTTGAACCTGGTCTTCAGATTAACGCAAATAATGAGAAGTTGAAACACGCTTACAATGAGCCATCAGAGGATAAACTTGTTCAAAAGAAGATAACTGCTGAAAGATCTATTGACAGCCCATTATTATTGGAACAGGACACGACAACAAAGCAGATTAAGCTGGGGTTTATCGGTGGACTTGTTTCGAGGGAAAAATCAGTTACATTCGAAAAAATTCTATTTCGTGCTACTGGGGGAAACCTTTTTCTCAAACAGTCAAACAGGCCCTGGTTGAACATTCTGTTCTTGATCTTTTGTCAGGGGAGAAGGTTTCAGGAAGACTTGCAGAATTGA 552 0.4149 MDLLQSEPMQIVRLLIPIESAYRSISYLGDLSLFQFKDIKRCEEMARRLRFFKEQMTKAGVSPSTWPAVKLEELEPGLQINANNEKLKHAYNEPSEDKLVQKKITAERSIDSPLLLEQDTTTKQIKLGFIGGLVSREKSVTFEKILFRATGGNLFLKQSNRPWLNILFLIFCQGRRFQEDLQN* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1621 183 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1 104 - -
Vra5g1621 183 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 104 159 - -
Vra5g1621 183 PANTHER VACUOLAR PROTON ATPASES 1 104 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vra5g1621 183 PANTHER VACUOLAR PROTON ATPASES 104 159 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1621 Vra-Chr5 22643969 22648631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1621 1 159 Primary Pumps ATPases(2) AT4G39080 46.190 1.37e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1621 K02154 - vra:106762221 362.844