Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1600 ATGCTTTCCAAATTGGTAGAAGAGCATCCTTACCTGTGTTCCCATGTTGCTCTCTTGTGTTTTCTTTTATTCTGTCAAAAAGCATGGACACTTTGGTGCACAAACTACCCCTCTCTGTCAAACATTCCTCCGGGGAATCGAGGATTACCCTTTCTCGGAGAGACACTTCAGTTCATGGCCGCCATCAACAACACCAAAGGAGTCTATGAATTTGTTCAAGCTCGCCGACTCCGGTATGGAAAATGCTTCAAGACGAAGTTATTCGGGGAAACGCACGTTTTCATATCGGGCACGGAGTCCGCAAAAGTGATTCTAAACAACGAGGAGAAATTCTCAAAGAAATATATGAAGTCAATCGCTGAGCTTGTTGGACGCCATAGCTTGCTCTGCGCTACACACCAACATCACAAACTTATTCGCGGTTCTCTGTTTTCTCTATTCTCCACGCAGTCTTTGTCTTCCTTCGTTAAACTCTTTGATTCACTTCTTCTTGAAGCTACAACTACTTGGAAATCTGGATCTGTTCTCGTTATTCAAGATGAAACACTAAAGGCGATGTGCAAGATGCTAATAAGCATCGAAAATGGCTACCAATTAGAGAGCATGCAAAATGAGGTTTCTCGTTTGGGTGAAGCAATGTTAGCCTTACCCGTGAGGTTACCCTGGACCAGATTCTACAAAGGCCTTCAGGCTCGAAAAAGGATAATGGATATATTGGAGAAGACTATAAGTGAAAGAAGAAGTGGAATTGCAACTAGCCATGTCGATTTCCTTCAACAACTTTTGGATGATAAATCACACGACGATGGAATCCCAATGCTAACAGAGAAAGAGATCAAAGACAATATCTTAACTATGATAATTGCTGGACAGGACACGATAGCAAATGCGATGACATGGATGATCAAATTTGTGGATGAGAATCCGCTTGTTTTTAATACCCTTATGAAGGAGCAACTTGAGATTGAGAAGAACGGTTCGAGAAATTCATATCTTACAGTAGAGGCCCTAAATGAAATGCCATATGCTTCTAAGGTTGTAAAAGAAGCATTAAGAAAGGCATCTGTGGTGCAGTGGTTACCTAGAGTAGCACTCGAGGACTGTGTTATTGAAGGATATAAAATCAAGAAGGGGTGGAACATTAACGTGGATGCTAGATCGATACACCATGATCCAACCGTGCACAATGATCCGGGTGTGTTCGATCCTTCAAGATTCCCTGCAGAGTCAAAACCATACAGCTTCTTAGCTTTTGGGATGGGAGGAAGGGCGTGCCTAGGGAAGAACATGGCTAAAGCCATGATGTTGGTATTTCTCCATCGTTTCATCACCAATTGCAAGTGGAAGGTGATTGATTCTGACTCAAGTATTCAGAAAGGGGCACTTTTTACAAAACTTAAGAGCGGATATCCTGTCCGTTTGATCTCGACCAAGGATGCCCAAAACCAAACCATGTGA 1458 0.4252 MLSKLVEEHPYLCSHVALLCFLLFCQKAWTLWCTNYPSLSNIPPGNRGLPFLGETLQFMAAINNTKGVYEFVQARRLRYGKCFKTKLFGETHVFISGTESAKVILNNEEKFSKKYMKSIAELVGRHSLLCATHQHHKLIRGSLFSLFSTQSLSSFVKLFDSLLLEATTTWKSGSVLVIQDETLKAMCKMLISIENGYQLESMQNEVSRLGEAMLALPVRLPWTRFYKGLQARKRIMDILEKTISERRSGIATSHVDFLQQLLDDKSHDDGIPMLTEKEIKDNILTMIIAGQDTIANAMTWMIKFVDENPLVFNTLMKEQLEIEKNGSRNSYLTVEALNEMPYASKVVKEALRKASVVQWLPRVALEDCVIEGYKIKKGWNINVDARSIHHDPTVHNDPGVFDPSRFPAESKPYSFLAFGMGGRACLGKNMAKAMMLVFLHRFITNCKWKVIDSDSSIQKGALFTKLKSGYPVRLISTKDAQNQTM* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1600 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Vra5g1600 485 Gene3D Cytochrome P450 35 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1600 485 Pfam Cytochrome P450 43 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1600 485 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1600 485 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1600 485 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1600 485 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1600 485 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1600 485 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1600 485 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1600 485 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1600 485 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1600 485 SUPERFAMILY Cytochrome P450 38 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1600 485 PANTHER CYTOCHROME P450, FAMILY 722, SUBFAMILY A, POLYPEPTIDE 1 16 477 - -
Vra5g1600 485 PANTHER CYTOCHROME P450 26 16 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1600 Vra-Chr5 22464241 22467330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1600 38 448 Cytochrome P450 AT1G19630 57.757 7.57e-175 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1600 - - lang:109327951 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1600 5 22464241 22467330 Vra5g1600 5 22464241 22467330 ECH