Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1584 ATGCCACTAGTTTTGGCAAGAAGCACAACAGACAAACTAAAAATGTCATACGAATACGAGAATTATGACCCCTCCTTCCCCGACCAACCTGTGGTTGACTTATACCTCCCTGTCTGGGCAAGGTTACCAGCTTTCCACTCCAAACCAGCTTTCATTTGGGCTCAAGACTTACAAACCACCACTATCCTCACCTACCAACAACTCAACGACACTGTTCATCTCATCTCATCACAGCTGCAGAGTTCATTGCAAAGAGGAGACACTGTACTTCTTCTCTGCTCTCCAGGACTTGACCTAGTTGAGCTCATTTTCGGCTGCCAAAGAGCTGGTCTCTTGAGCGTACCTATAGTCCCTCCTCACCCTTCTTTCTCAAATCAAAACTATCACCACCTCGTAAGAGCCATTTCTCAGACCAAACCCAAAGCTGCCATAGCTCACTCTAACTACATTTCAAGCATTCGACGCTACCTCTCTTCCCCTCACAACAACACCAAGCTTGCTCACATGCTGCAAAACATCCACTGGATTTCCATTGACCATGTCAAACATGGTAAACCCGTCGTTACTGTAAACAACCGTGATTCCCTAACATACAGTGGTTGTAAAGCAGATGAAGTTTATTTGGTTCAGTACACTTCTGGAGCAACTGGTGTCCCAAAACCCGTGCTTGTCACTGCTGGCTCAGCTGCTCACAACGTTAGAACAGCCAGAAAAGCTTACGATCTTCATCCAAACAGCACCATCGTTTCGTGGCTGCCACAGTATCATGATTGCGGCCTCATGTTTCTGTTGCTGACCATTGTCTCCGGTGCCACGTGTGTTCTCACTTCCCCAAACGCGTTCATCAAACGCCCCAGATTCTGGCTTGAACTCTTGTCCGAATTCAAGGCCACTTGCACTCCCGTTCCCTCGTTCACATTGCCACTGGTCATCAAGCGTGGAGGGATTCACCAAAGCGCTTTACCCATCAACCTGTCAACTTTGAAGAACCTTATAATCATCAATGAACCTATCTATAGAGACTCTGTGGAAGAATTCGTTCATACTTTTTCACCATTCGGGTTAAGCCCTTCTTCTATCTCTCCTTCCTACGGGTTGGCAGAGAATTGTACCTTTGTGTCCACTGCGTGGAGGAACTGCCACAGTGACAATGATGGTGCTTATGCTTCCAGCTTCCCAGATTTCCCAACTCACAACAAACTGTTACCGGTTGCAAGGCTCGGAAACGTGGAGCAGGAAGACGTGGAGATTATGGTCGTAAACGAAGAAACCTTGGAACCGAGTGAGGATGGTGTCGAAGGAGAAATTTGGGTTGCTTCACCAAGCAATGCTTCTGGGTACCTTGGCCACCCTAGTTTAACAAGAGAGGTGTTTCATGGAAGACTGAGAAACATGGTTAGTAAGTGCTTTCTTCGAACCGGGGACAGAGGCATCGTGAAAGGAGAAAAGAGATACCTCTTTGTTACTGGTCGCTGTCAAGATGTCATGGAACTCGAAAACGGTGAAAAGGTTCATCCACATTACATAGAGACTGCGGCTTACAACATTTGCTCCAAGTTACTCAGAGGAGGCTGCGTTGCAGCGTTTAAAGTTTCAGCAATGGTGGTGGTTGTGGCGGAGATGCAGAGGTTCGAAAAGGATGTGGATGTGGTTGTTTTGAAGTGGGTCTGCGAGAAAATTAAGGCAGGTGTCTGGAAGAAGGAAAAGGTAGAGATTGGATGGGTGGTTTTGGTTAAGAGTGGGTGTATTCCCAAAACCACTTCTGGAAAATTGCAAAGAGGGAGGTGTAAGGAGAAGCTTCTCGCAGGGGAAATGGTGATTCTGATGGAGATGAGGTTTGCAGAAGATGTTACTGTTTTTACGAGAGCACAGAACGTAAGAGAAGAAGCTTGGGAAGAGAAGGGCCACGTGGACAGATCCCTTTCATGTATGGACACTCCTGGCTCTCTAATATCTCTTCTGTGA 1965 0.4687 MPLVLARSTTDKLKMSYEYENYDPSFPDQPVVDLYLPVWARLPAFHSKPAFIWAQDLQTTTILTYQQLNDTVHLISSQLQSSLQRGDTVLLLCSPGLDLVELIFGCQRAGLLSVPIVPPHPSFSNQNYHHLVRAISQTKPKAAIAHSNYISSIRRYLSSPHNNTKLAHMLQNIHWISIDHVKHGKPVVTVNNRDSLTYSGCKADEVYLVQYTSGATGVPKPVLVTAGSAAHNVRTARKAYDLHPNSTIVSWLPQYHDCGLMFLLLTIVSGATCVLTSPNAFIKRPRFWLELLSEFKATCTPVPSFTLPLVIKRGGIHQSALPINLSTLKNLIIINEPIYRDSVEEFVHTFSPFGLSPSSISPSYGLAENCTFVSTAWRNCHSDNDGAYASSFPDFPTHNKLLPVARLGNVEQEDVEIMVVNEETLEPSEDGVEGEIWVASPSNASGYLGHPSLTREVFHGRLRNMVSKCFLRTGDRGIVKGEKRYLFVTGRCQDVMELENGEKVHPHYIETAAYNICSKLLRGGCVAAFKVSAMVVVVAEMQRFEKDVDVVVLKWVCEKIKAGVWKKEKVEIGWVVLVKSGCIPKTTSGKLQRGRCKEKLLAGEMVILMEMRFAEDVTVFTRAQNVREEAWEEKGHVDRSLSCMDTPGSLISLL* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1584 654 Gene3D - 23 492 IPR042099 -
Vra5g1584 654 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 20 622 - -
Vra5g1584 654 Gene3D - 498 616 IPR045851 -
Vra5g1584 654 CDD FAAL 44 602 IPR040097 GO:0008610
Vra5g1584 654 PANTHER 10A19I.5 20 622 - -
Vra5g1584 654 SUPERFAMILY Acetyl-CoA synthetase-like 28 602 - -
Vra5g1584 654 Pfam AMP-binding enzyme 45 498 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1584 Vra-Chr5 22380640 22382604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1584 201 600 Monolignol Biosynthesis Gene Families AT4G19010 25.537 3.19e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1584 - - vra:106760475 1309.66