Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1572 ATGTCCAAACGATTCAAAATCAAATTCAATGTCCCTTCCATATGTCGCTCAAAAGACCTTTCTTCTTTCCCAGGAAACCCCGTTCCTGCCATATACCGTCTCTCTCCCGTTAACCACAACGCACGTCATTCCGACCTTCCTTCTCCCCAATCGTCCAAGATAACGTCGTCCGTTTCGCAGGGGTGCAAAATGTGCCGTGACAAGGAGCCATACAAAGCGAAATCCAGAAGCCGGAAAGGCACGTCGAGCGTTCCGTCGAGGCGAAGCGATTTTCTAATCGACAACGTCGAGGAAGAGGAAAGCGAGACGCTGATTTCTTGCTTGACAAGTTTCTCCGACGAGATTTGTCACGAGGAGGCGAGGGATTTGAGAAACGGTGGGCATAGAAGGAAGACGAGCAGCGTGAAGAAGGTTCAGAGCGTGAGGTTTCGGAGCTCTTCGGAGAATCGAGGAGGAGCGGGAACGACGGAGAAGGTGAAGAAAATGTCGACGACGGTGACGCGGAGCAATGTTGAGGGGAAGGTGAGGGAGAGCTTTGCGGTGGTGAAGAAGTCGAAGGATCCTTACGAAGACTTCAAGAAATCGATGATGGAGATGATAACGGAGATGGAGATGTCTGAGGCGGAAGACCTGGAACAGCTTTTGCAGTGTTTCTTGGCTTTGAACTCGCGGAGTTACCATGCAGTCATTGTTAGAGTTTTCATGGAGATTTGGCAACAAATGTTCGTGTGGAACCCAAAGTCCGCCAAAAATCTCACGGACGTTAAAACTGAAACGGAAAAGTAA 786 0.4962 MSKRFKIKFNVPSICRSKDLSSFPGNPVPAIYRLSPVNHNARHSDLPSPQSSKITSSVSQGCKMCRDKEPYKAKSRSRKGTSSVPSRRSDFLIDNVEEEESETLISCLTSFSDEICHEEARDLRNGGHRRKTSSVKKVQSVRFRSSSENRGGAGTTEKVKKMSTTVTRSNVEGKVRESFAVVKKSKDPYEDFKKSMMEMITEMEMSEAEDLEQLLQCFLALNSRSYHAVIVRVFMEIWQQMFVWNPKSAKNLTDVKTETEK* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1572 261 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 179 241 IPR006458 -
Vra5g1572 261 PANTHER TRANSCRIPTION REPRESSOR OFP7 49 248 - -
Vra5g1572 261 Pfam Transcriptional repressor, ovate 185 242 IPR006458 -
Vra5g1572 261 MobiDBLite consensus disorder prediction 138 163 - -
Vra5g1572 261 MobiDBLite consensus disorder prediction 122 163 - -
Vra5g1572 261 MobiDBLite consensus disorder prediction 41 62 - -
Vra5g1572 261 MobiDBLite consensus disorder prediction 41 95 - -
Vra5g1572 261 ProSiteProfiles OVATE domain profile. 181 240 IPR006458 -
Vra5g1572 261 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 49 248 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1572 Vra-Chr5 22301615 22302881 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vra5g1572 Ovate 5.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1572 - - gmx:102662518 352.443