Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1563 ATGACTTCCGACGGAGCAACGTCGGCGGCGGTGGCCAATCGGCGGAAACCATCCTGGAGGGAAAGAGAGAACAACAGGAGGAGAGAGAGGCGGAGAAGAGCCATAGCAGCCAAGATATACACTGGCCTCCGTGCTCAGGGGAACTACAATTTGCCCAAACATTGCGACAACAACGAGGTTTTGAAGGCTCTCTGTGCCGAAGCTGGCTGGACTGTTGAAGAAGATGGTACAACATATCGCAAGGGATGCAGGGCACCACTTCCAGATGGTGTTGGCACCTCAACTAGAAACACCCCTTTTTCATCCCAAAATCCGAGTCCCCTCTCGTCGTCATTTCCGAGTCCAATTCCTTCCTACCAAGTGAGCCCCTCCTCCTCCTCTTTCCCGAGCCCCTCTCGTATGGATGACAACAATGCGTCAACTTTGATTCCCTATATTCGACATTCGTTCTCTGCTTCTCTCCCTCCTCTGAGGATATCAAATAGCGCCCCTGTGACCCCGCCTTTGTCCTCGCCAACTTCAAGAAACCCCAAACCAATCCCAACATGGGACTCCATTGTCAAAGCCTCCATGGCATCATCCTTCAACCACCATCACCACCACCATCAAAACCACCCTTTCTTTGCGGCTTCTGCCCCGGCTAGCCCCACACACCGCCACCTTCATGCCCCGCCCACTATTCCCGAATGTGACGAGTCTGATACCTCCACTGTTGAGTCTGGCCAGTGGTTGAACTTCCAAGCATTTGGACCTTCTGTTTCTGCAGTGCCTGTCTCTCCCACCTTGAACTTTATCAAACCTGTTGCGAGTCAGCAGCACAAGCACAACCTTAACCACCCTGATAACCGTATCCAAGAGATGAGAAACTCAGAAGTCCAATTTGGAGTGCAGGTGAAGCCCTGGGTTGGGGAGAGGATTCATGAAGGTGGATTGGATGATTTGGAGCTCACACTAGGAAGCGGGAAGACGCTTGCTTAG 978 0.5245 MTSDGATSAAVANRRKPSWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWTVEEDGTTYRKGCRAPLPDGVGTSTRNTPFSSQNPSPLSSSFPSPIPSYQVSPSSSSFPSPSRMDDNNASTLIPYIRHSFSASLPPLRISNSAPVTPPLSSPTSRNPKPIPTWDSIVKASMASSFNHHHHHHQNHPFFAASAPASPTHRHLHAPPTIPECDESDTSTVESGQWLNFQAFGPSVSAVPVSPTLNFIKPVASQQHKHNLNHPDNRIQEMRNSEVQFGVQVKPWVGERIHEGGLDDLELTLGSGKTLA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1563 325 MobiDBLite consensus disorder prediction 79 135 - -
Vra5g1563 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 139 IPR008540 -
Vra5g1563 325 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 323 - -
Vra5g1563 325 MobiDBLite consensus disorder prediction 15 30 - -
Vra5g1563 325 MobiDBLite consensus disorder prediction 1 32 - -
Vra5g1563 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 323 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vra5g1563 325 MobiDBLite consensus disorder prediction 91 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1563 Vra-Chr5 22205823 22208186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1563 1 322 BZR Transcription Factor Family AT1G75080 65.689 6.14e-119 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vra5g1563 BES1_N 1.1e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1563 K14503 - gmx:100803869 488.804