LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra5g1553	ATGGCATCAAGTTTAACGGTATCTCCTCTATCGGTGCACCTACGATCCTCCTCATGCAACTGGAAGACCTCTTCCTCCATGCGTCCTTTTACAATCAAAGCTTCAGTCTCTGAAACGACGTCGTTGCCAGCGTCGGAGACGGCCAAGCTCCCGCTGCGCGAAATCCCCGGAGACTACGGTCTCCCTTTCATAGGACCCATCAGCGACCGCCACGACTATTTCTACAACCAAGGCCCCGACGTCTTCTTCCAATCCCGCGTCAAGAAGTACAACTCCACCGTCTTCCGCGTCAACATGCCACCTGGCCCCTTCATCAGTTCCGACCCAAAGGTCATCGTTTTGCTTGATGCCAAAAGCTTCCCCGTCCTCTTCGACGTGACAAAAGTAGAAAAACGTGACCTCTTCACCGGCACCTACATGCCCTCCCTCGAACTAACCGGCGGTTACCGAATCCTCTCCTACATCGACCCCTCCGAACCCAAACACGAAAAACTAAAAAGCCTCCTCTTCTTCCTTCTCAAACACCGAAGCAGACACGTCATTCCCGAGTTCCACTCAACCTACACAACCCTGTTCGGAACCCTCGAGAAAGAGCTGGCAGACAAAGGAAAAGCTGCTTTTACAGACCCCAGTGACCAAGCAGCGTTTAACTTCCTGGCTCGCGCGCTTTTTGGCACCAACCCCTCCGACACAAAACTCGGAAGCGACGGCCCAGGTATAATACNAANATGGGTTCTGCTCCAGCTTGNCCCTATTTTGACATTGGGCCTTCCCAAATTCATTGAAGATCCCATTCTTCACACCTTCCCCCTCCCTCCTTTTCTGATAAAGANCGACTACCAGAGGCTCTACGATTTCTTNTACGAGTCCGCNGGGGCTGTATTTGACGAAGCGTCGCGTCTTGGTATCTCCAAAGAAGAAGCGTGCCACAACCTGTTATTCGCCACGTGCTTTAACTCGTTTGGCGGAATGAAAATTTTATTCCCCAGCATGCTGAAGNGGATTGCCGGTGNGGGCTTGAAACTTCAAGCTCGGCTCGCGGNGGAGGTGAGGGCCGCCGTTAAGGCTAACGGCGGGAAGGTGACGATGGCGGCGTTGGAAGCGATGCCGCTGGTGAAGTCTGTGGTGTACGAGGCATTTCGCATTGAACCGCCGGTGCCGCTGCAGTACGCGAGGGCGAAGAGGGACTTGGTGATCGAGAGTCACGACAATGCGTTCTCGGTGAAGAAAGGGGAGATGCTGTTTGGGTATCAGCCGTTTGCGACTAAGGATCCGAAGATATTTGAAAATGCAGAGGAGTATGTGGCTGATAGGTTCCTGGGGGAGGGAGAGAAGCTGCTGAAATACGTGCTTTGGTCGAACGGTCCCGAGACCGAG	1377	0.5309	MASSLTVSPLSVHLRSSSCNWKTSSSMRPFTIKASVSETTSLPASETAKLPLREIPGDYGLPFIGPISDRHDYFYNQGPDVFFQSRVKKYNSTVFRVNMPPGPFISSDPKVIVLLDAKSFPVLFDVTKVEKRDLFTGTYMPSLELTGGYRILSYIDPSEPKHEKLKSLLFFLLKHRSRHVIPEFHSTYTTLFGTLEKELADKGKAAFTDPSDQAAFNFLARALFGTNPSDTKLGSDGPGIIXXWVLLQLXPILTLGLPKFIEDPILHTFPLPPFLIKXDYQRLYDFXYESAGAVFDEASRLGISKEEACHNLLFATCFNSFGGMKILFPSMLKXIAGXGLKLQARLAXEVRAAVKANGGKVTMAALEAMPLVKSVVYEAFRIEPPVPLQYARAKRDLVIESHDNAFSVKKGEMLFGYQPFATKDPKIFENAEEYVADRFLGEGEKLLKYVLWSNGPETE	459

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra5g1553	459	Gene3D	Cytochrome P450	50	459	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vra5g1553	459	PRINTS	E-class P450 group IV signature	369	385	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vra5g1553	459	PRINTS	E-class P450 group IV signature	406	420	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vra5g1553	459	PRINTS	E-class P450 group IV signature	422	440	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vra5g1553	459	PANTHER	ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE	35	459	-	-
	Vra5g1553	459	PANTHER	CYTOCHROME P450 26	35	459	-	-
	Vra5g1553	459	SUPERFAMILY	Cytochrome P450	51	456	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vra5g1553	459	Pfam	Cytochrome P450	342	444	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra5g1553	Vra-Chr5	22114063	22115571	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra5g1553	1	459	Cytochrome P450	AT5G42650	63.734	0.0	587

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra5g1553	K01723		-	gmx:100807192	706.442

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra5g1553	5	22114063	22115571	Vra5g1553	5	22114063	22115571	ECH