Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1551 ATGTTCAACATGTTGTACCAGGAAAACTCTCTCTCCAAGAACACAGTACCACTTACCGTCTCATTCTTCTGCCTGTTTTTGTTTCTCTTTATTCTTTTGTCCATTTCCAGAAAGCTCAAAAACCACAGTGCTGCAACAAGAAAAGCACCGCCAGAAGCAAGTGGCGCATGGCCTTTGATTGGTCACCTCCACCTCTTACGGGCGTCCAAACTGCCACATGATACGTTGGGCAACATGGCGGACAAATACGGTCCCATATTCTCCTTGCGTCTAGGAGCTCACAAAACGCTGGTTGTGAGCGATTGGGAAATGGCCAAACAGTGCTTTACCGTCAACGACAGAGCGTTCGCTAACCGTCCAAAATCCATGAGTTTTGAAGTGTTGGGCTACAACTCCTCCTTGATCGGGTTCATCCCCTACGGTTCTTACTGGCGTCAGATGCGTAAAATCTCCATGCTGGAGCTCCTCTGTTCTCGCCGCATAGACGCGCTGAAGCCCGTGATGGAAGCCGAAGTGAAAGCAGCGATGAGAGAGAGTTATAATTTGTGGTTGAAGAAGAAAAACGGCTTTTCCGAAATGAATAGGTGGTTTGGGAACATAGCGTTGAACATTATGTTCCAAACTGTGGTAGGAAAACGATTTTTTAGTGACGGCGACGTGAACGAAGAGAACGAACGGCTCCGAAAAGCATTCAGGGATCTGTTTGATCTGAGCGGTTCACTCGCTGTGTCTGACTGTCTGCCCTATTTGAGATGGTTGGATTTGGATGGTAAAGAGAGGAAAATGAAGAGAACGGCGAAAGAGATAGATGGGTTTATCCAGATTTGGCTTGAAGAACACAAACGCAACCGGGATTGTGGTTCAGGTGAACGGAAACAGAGCCAGGACCTGATGGACGTGCTTCTTGGACTTGTTGAAGAGGGTGAAGAGTTTGATGGTCATGACTCTGACACCTCAATCAAAGCTATGTGCCTGTCTTTAATCATGGCAGGTTCACATACAACAACAAAAACATTGGTATGGGCTCTCTTTTTACTTCTTAATGATCGTGAAATTCTACAAGAAGCCATTAAAGAATTAGATATAGAAATTGGAAATAAAAGGATGGTAGAGGTATCAGATTTGAAGAAACTGAAGTATCTTGAATCTATTATCAAGGAAACATTACGTTTATATCCACCTACACCACTTAATTTGCCACACGAGTCTATGGAAAATTGCACAGTGGGTGGATATCATGTAGCATCGGGCACACGTCTTTTAACTAATCTTTCAAAACTTCAGAGAGATCCATCTTTATATGAAAATCCCCTTGAATTTTGTCCAGAAAGATTCTTAACAATCCACAAGGAAGTGGACGTGAAGGGTCAACATTTTGAGTTGATTCCATTCGGTGCAGGTAGAAGAATGTGTCCTGGGATATCTTTCGGTCTTCAAGCGATGCAACTCATACTTGCCACCTTATTGCATGGGTTTGACATTGTAACTAATGGTGGAGGACCTGTTGATACAGTTGAACAAAACATCAGAGCTTTTCCCCTCCAAGTCATCCTTACTCCGCGTCTAACTTCTTATATTTATGATCAAATATAA 1593 0.4344 MFNMLYQENSLSKNTVPLTVSFFCLFLFLFILLSISRKLKNHSAATRKAPPEASGAWPLIGHLHLLRASKLPHDTLGNMADKYGPIFSLRLGAHKTLVVSDWEMAKQCFTVNDRAFANRPKSMSFEVLGYNSSLIGFIPYGSYWRQMRKISMLELLCSRRIDALKPVMEAEVKAAMRESYNLWLKKKNGFSEMNRWFGNIALNIMFQTVVGKRFFSDGDVNEENERLRKAFRDLFDLSGSLAVSDCLPYLRWLDLDGKERKMKRTAKEIDGFIQIWLEEHKRNRDCGSGERKQSQDLMDVLLGLVEEGEEFDGHDSDTSIKAMCLSLIMAGSHTTTKTLVWALFLLLNDREILQEAIKELDIEIGNKRMVEVSDLKKLKYLESIIKETLRLYPPTPLNLPHESMENCTVGGYHVASGTRLLTNLSKLQRDPSLYENPLEFCPERFLTIHKEVDVKGQHFELIPFGAGRRMCPGISFGLQAMQLILATLLHGFDIVTNGGGPVDTVEQNIRAFPLQVILTPRLTSYIYDQI* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1551 530 Pfam Cytochrome P450 53 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Vra5g1551 530 PANTHER CYTOCHROME P450 47 527 - -
Vra5g1551 530 Gene3D Cytochrome P450 34 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 SUPERFAMILY Cytochrome P450 55 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1551 530 PANTHER CYTOCHROME P450 82C3-RELATED 47 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1551 Vra-Chr5 22098625 22100940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1551 18 527 Cytochrome P450 AT4G31970 45.038 3.08e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1551 - - gmx:100787630 723.391