Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1549 ATGTTGTACCACGAAAATCCTCTCTCCAACTACACAGAACCACTCACCGTTTCTTTCTGCTTGTTGTTATTTCTCTTCATTCTTTCGTCCATTTCCAGAAAGCTCAAAAACCACAGTGCAGGAACAAGGAAATCACCGCCAGAAGCAAGTGGCGCATGGCCTTTGATTGGTCACCTCCATCTCTTAGGAGGGTCCAAACCGCCACACGTTACGTTGGGATGCATGGCGGACAAATACGGCCCCATCTTCACCTTGCGTCTGGGAGCTCACAAAACGCTGATTGTGAGCGATTGGGAAATGGCCAAACAGTGCTTTACCGCCAACGACAGAGCGTTCGCTAACCGTCCAAAATCCATGACCTTTGAAGTGTTGGGCTACAACTCCTCCTTGATTGCGTTCATCCCCTACGGTTCTTACTGGCGCCAGGTACGGAAAATCGCCACGTTGGAGCTTCTCTCTTCTCGCCGCATAGACGCGCTGAAGCCCGTGATGGAAGCCGAAGTGAAAGCAGCGATGAGAGAGAGTTATAATTTGTGGTTGAAGAAGAAAAACGGCTTTTCCGAAATGAAGAGGTGGTTTGGGAACATAGCGTTGAACATTATGTTCCAAACTGTGGTAGGAAAACGTTTTTCTAGTGACGGCGACGTGAACGAAGAGAACGAACGGCTCCGAGTGGCATTCAGAAAGTTTTTGGATCTGGGCGGTTCATTCGCTGTGTCTGACTGTATGCCCTATTTGAGATGGTTGGATTTGGATGGTAAAGAGAGGAAAATGAAGAGAACGGCCAAAGAGATAGATGGGTTTCTCCAGATTTGGCTTGAAGAACACAAACGCAACCGGGATTGTAGTTCAGGTGAACGGAAACAGAGCCATGACCTGATGGACGTGCTTCTTGGACTTGTTGAAGAGGGTGAAGAGTTTGATGGTCATGACTCTGACACCAAAATCAAAGCTATGTGCCTGGCTTTAATTTTGGCTGGTTCAGATACCACAACAGGAACATTGGCATGGGCTCTGTCTTTACTTCTCAATAATCGTAAAGTTCTACGAAAAGCCATTGAGGAATTGGATGCAGAAATTGGAAGTAAAAGGATTGTAAATGTGTCAGATTTGAAGAAACTAAAGTATCTTGAATCTATCATCAAGGAAACACTACGTTTATATCCAGCTGCACCACTTAGTGTGCCACACGAGTCCATGGAAAATTGCACAGTGGGTGGATATCACGTAGCATCCGACACACGTCTTTTGACTAATCTTTCAAAACTTCAGAGAGATCCATCTTTATATGCAAATCCGCTTGAATTTTGTCCAGAAAGATTCTTAACAACCCACAAGGAAGTGGACGTGAATGGTCAACATTTTGAGCTGATTCCATTTGGTGCAGGTAGAAGAATGTGCCCTGGGATATCTTTCAGTCTCCAAGCGATGCAACTCACACTTGCTACCTTATTGCATGGGTTTGATATTGCAACCAATGATGGGGGACCTGTTGATATGGTTGAACAGATTGGCTTTACCAACATCAGAGCCTCACCCCTCCAAGTCATTCTTACTCCTCGACTATCTTCTCATATTTATGATCAAATCTAA 1593 0.4513 MLYHENPLSNYTEPLTVSFCLLLFLFILSSISRKLKNHSAGTRKSPPEASGAWPLIGHLHLLGGSKPPHVTLGCMADKYGPIFTLRLGAHKTLIVSDWEMAKQCFTANDRAFANRPKSMTFEVLGYNSSLIAFIPYGSYWRQVRKIATLELLSSRRIDALKPVMEAEVKAAMRESYNLWLKKKNGFSEMKRWFGNIALNIMFQTVVGKRFSSDGDVNEENERLRVAFRKFLDLGGSFAVSDCMPYLRWLDLDGKERKMKRTAKEIDGFLQIWLEEHKRNRDCSSGERKQSHDLMDVLLGLVEEGEEFDGHDSDTKIKAMCLALILAGSDTTTGTLAWALSLLLNNRKVLRKAIEELDAEIGSKRIVNVSDLKKLKYLESIIKETLRLYPAAPLSVPHESMENCTVGGYHVASDTRLLTNLSKLQRDPSLYANPLEFCPERFLTTHKEVDVNGQHFELIPFGAGRRMCPGISFSLQAMQLTLATLLHGFDIATNDGGPVDMVEQIGFTNIRASPLQVILTPRLSSHIYDQI* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1549 530 SUPERFAMILY Cytochrome P450 51 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 PANTHER CYTOCHROME P450 82C3-RELATED 43 527 - -
Vra5g1549 530 Coils Coil 339 359 - -
Vra5g1549 530 Gene3D Cytochrome P450 30 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 Pfam Cytochrome P450 49 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 PANTHER CYTOCHROME P450 43 527 - -
Vra5g1549 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Vra5g1549 530 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1549 530 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1549 Vra-Chr5 22087397 22090045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1549 47 527 Cytochrome P450 AT4G31940 47.561 1.10e-162 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1549 - - gmx:100787630 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1549 5 22087397 22090045 Vra5g1549 5 22087397 22090045 ECH