Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1547 ATGATTGGGTTCAGCCCCTATGGTTCTTACTGGCGCCATGTGCGCAAAATCGCCACGGTGGAGCTCCTCTCTTCGCATCGCATAGACACTCTGAAGCACGTGATGGATGCCGAAGTGAAAGCAGCAATGAGGGACAGTTACAGTTTGTGGTTGAAGAAGAAAGACGGCGGTTCTGAAATGAAGAGGTGGTTTGGGGACATAACATTGAATATAATGTTCAGGACGGTGGTAGGAAAACGTTTTGGCAGTGACGGCGGTGTGAATGAAGAGAACGAACAGCTACGAAAGGCATTGAGGGAGTTGTTTGATCTGAGCGGTTCATTCGCAGTTTCTGACTCTCTGCCATATCTAAGATGGTTAGATTTGGATGGTATCGAGAAGAAAATGAAGAGAACGGCAAAAGATTTAGATGGGTTTGTTCAGAATTGGCTTGAAGAACACAAACGCAACAGAGGTTGTGATTTAGGTGAAGGAAAACATAACCAGGACCTGATGGACGTGCTTCTTGGGCTTGCCGAACAAGGCGAAGAGTTTGACGGTCATGACCCTGAAACCACAATCAAAGCCACGTGTCTGGCTTTAATTTTGGCTGGTTCAGATACGACAACAGGAACATTAGTATGGGCTCTCTCGTTACTTTTGAATAATCCTGAAATTCTGAAAAAAGTGATCTATGAATTAGATAAAGAAGTTGGGAGTGAAAGGATGGTAGAGATGTCAGATTTAAAGAAGCTAAAGTATCTTCATGCTATCATCAAAGAAACACTGCGTTTATATCCAGCAGCACCACTTGGTGTGCCACACGAGTCCATGGAAAATTGCACAGTGGGTGGATATCACATAGCATCGGGCACACGTCTTTTGACTAATCTTTCAAAACTTCAAAGAGATCCATCTTTATATGAAAATCCCCTTGAATTTTGTCCAGAAAGATTCTTAACAACCCACAAGGAAGTGGACGTGAAGGGTCAACATTTTGAATTGATTCCATTCGGTGCAGGTAGAAGAATGTGTCCTGGGATATCTTTTGGTCTTCAAGCGATGCAACTCACACTTGCTACCTTATTGCATGGATTTGATATTGCAACCATTGATGGAAGACTTGTTGATATGGTTGAACAGATTGGTTTAACCAACATTAAAGCTTCTCCCCTCCAAGTCATTCTTACTCCCCGACTATCTTCTCATATTTATGAATAA 1200 0.4267 MIGFSPYGSYWRHVRKIATVELLSSHRIDTLKHVMDAEVKAAMRDSYSLWLKKKDGGSEMKRWFGDITLNIMFRTVVGKRFGSDGGVNEENEQLRKALRELFDLSGSFAVSDSLPYLRWLDLDGIEKKMKRTAKDLDGFVQNWLEEHKRNRGCDLGEGKHNQDLMDVLLGLAEQGEEFDGHDPETTIKATCLALILAGSDTTTGTLVWALSLLLNNPEILKKVIYELDKEVGSERMVEMSDLKKLKYLHAIIKETLRLYPAAPLGVPHESMENCTVGGYHIASGTRLLTNLSKLQRDPSLYENPLEFCPERFLTTHKEVDVKGQHFELIPFGAGRRMCPGISFGLQAMQLTLATLLHGFDIATIDGRLVDMVEQIGLTNIKASPLQVILTPRLSSHIYE* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1547 399 PRINTS E-class P450 group I signature 67 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1547 399 PRINTS E-class P450 group I signature 186 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1547 399 PRINTS E-class P450 group I signature 206 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1547 399 PRINTS E-class P450 group I signature 249 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1547 399 PRINTS E-class P450 group I signature 290 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1547 399 PRINTS E-class P450 group I signature 328 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1547 399 PRINTS E-class P450 group I signature 338 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1547 399 PANTHER CYTOCHROME P450 82C3-RELATED 1 399 - -
Vra5g1547 399 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 331 340 IPR017972 GO:0005506|GO:0016705
Vra5g1547 399 PRINTS P450 superfamily signature 197 214 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1547 399 PRINTS P450 superfamily signature 250 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1547 399 PRINTS P450 superfamily signature 329 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1547 399 SUPERFAMILY Cytochrome P450 2 392 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1547 399 Gene3D Cytochrome P450 1 389 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1547 399 Pfam Cytochrome P450 8 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1547 399 PANTHER CYTOCHROME P450 1 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1547 Vra-Chr5 22059335 22061366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1547 1 398 Cytochrome P450 AT4G31940 50.244 3.91e-139 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1547 - - vra:106761706 798.89