Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1545 ATGGAAGCAGCAGCGCTTGCTGGAGTAGCTGTCTTTCTATTACTTAGTTACTTCATCAAATGGGCTACAGCAGGTTCTGCTCGCAAGCCACCGGAAGCAGCCGGTGGCTGGCCTTTAATCGGCCACCTTCGCCTCTTTGGTCGCTCCGCCGGTCAGCCTCTATACGAAACGCTAGGAGGCTTAGCAGACAAGTATGGTCCAATATTCAGCATCCGAATCGGTGTGCATCAGGCGGTAGTGGTGACCTCTTGGGAGTTAGCGAAGGAGTGTTTTACCACTCTGGACGTTGTTGTATCATCTCGTCCCAAATTCAGCGCCGCAAAAATCTTGACATACGACTATGCTAGTTTTGGGTTTTCCCCTTACGGACAATTCTGGCGCGACATGCATAAGATTACGGTTTCGGAGCTACTTTCTACCCGACGTGCTGAACAGCTTCGAGGAATTAGAGATTCGGAGGTGCAGAGTTCGTTGAATGAACTATACGGAACGTGGGTGGAGAAAAGAGGTGATTTGTTGGTGGAGATGAAGGAGTGGTTCGGGAACATGAATCTGAACGTGATTCTGAGGACGGTTGCGGGAAAGCGATACGGTGTGGGGAATGGAGATGAGGAACGGATGAGGGTTCGGAGGGTACTGAGAGAATTCTTTGATTTGATGGGGGTGGTTGTGATTGGGGATGCGATTCCATTTCTTGGGTGGCTTGATTTGGGAGGTGAAGTGAAGGAGATGAAAAAAACGGCTGTAGAAATGGATAGCTTCATGTCTGAATGGTTGGAAGAACATCGCCAACGAAGAGACTCAGATGGGAAGAAAAGAGAGGAAGACTTCATTGATGTGTTGCTGTCTGCTCTGGACGGGGTCGACCTTGCTGGTCACGATGCCGACACTGTCATTAAAGCCACATGTCTGACATTAATAGCTGCAGCAACGGATACTACAACAGTTACTATGAGTTGGGCATTATCGGTATTGTTGAATAATCGCGATGCCTTGAAGAAAGTTGAAGATGAATTGGATGAGCATGTGGGGATGGAAAGAGCGGTGAATGAATCTGACATAAACAAATTGGTTTACCTTCAAGCTGTAGTTAAAGAGTCAATGAGATTGTATGCAGCTGCACCACTACCTGGTCCACGTGAATTCACAAGCGATTGTACTTTAGGTGGCTACCATATCCAAGCAGGTACGAGATTGATTTTGAACATTTGGAAGATGCAGAGAGATCCACGTGTATGGGAAAATCCATTGGAGTTTGAGCCAGAAAGGTTCCTCACAACCCACAAGGGTGTGGATGTGAAGGGTCAACATTTTGAACTACTTCCCTTCGGTGGCGGAAGAAGGTCGTGCCCTGGCATGTCATTTGCCCTTCAAATGACACACTTAGCTTTAGCAGCTTTTTTGCAAGCATTTAAGGTCACAACACCGAACAATGAACCAGTTGACATGAGTCCCGTATTTGGACTCACACTCATCAAAGCCACACCACTTGAGGTTTTAATCCAACCTCGTTTACCACATCAACGTCTCCTTAATAATGTATCCTAA 1548 0.4696 MEAAALAGVAVFLLLSYFIKWATAGSARKPPEAAGGWPLIGHLRLFGRSAGQPLYETLGGLADKYGPIFSIRIGVHQAVVVTSWELAKECFTTLDVVVSSRPKFSAAKILTYDYASFGFSPYGQFWRDMHKITVSELLSTRRAEQLRGIRDSEVQSSLNELYGTWVEKRGDLLVEMKEWFGNMNLNVILRTVAGKRYGVGNGDEERMRVRRVLREFFDLMGVVVIGDAIPFLGWLDLGGEVKEMKKTAVEMDSFMSEWLEEHRQRRDSDGKKREEDFIDVLLSALDGVDLAGHDADTVIKATCLTLIAAATDTTTVTMSWALSVLLNNRDALKKVEDELDEHVGMERAVNESDINKLVYLQAVVKESMRLYAAAPLPGPREFTSDCTLGGYHIQAGTRLILNIWKMQRDPRVWENPLEFEPERFLTTHKGVDVKGQHFELLPFGGGRRSCPGMSFALQMTHLALAAFLQAFKVTTPNNEPVDMSPVFGLTLIKATPLEVLIQPRLPHQRLLNNVS* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1545 515 Pfam Cytochrome P450 35 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 Gene3D Cytochrome P450 25 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 PANTHER CYTOCHROME P450 82C3-RELATED 7 508 - -
Vra5g1545 515 SUPERFAMILY Cytochrome P450 36 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1545 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Vra5g1545 515 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1545 Vra-Chr5 22049791 22051659 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1545 9 508 Cytochrome P450 AT4G31940 49.023 6.00e-177 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1545 - - gmx:100779080 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1545 5 22049791 22051659 Vra5g1545 5 22049791 22051659 ECH