Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1544 ATGTCAGCCTTTCTCTGGCATGCTTTTCTCGGGAAGAAGAGAAACAATAGCAAAGAAGCTCCTGTCCCAGTTGGTGCATGGCCACTCATTGGTCACCTACACCTTCTGGGTGGCCATGACCAACTTCTCTACCGAACACTAGGAACAATGGCTGATCAATATGGACCAGCGTTTAACATCTGGCTCGGTAGTCGCAGAGCATTTGTAGTTAGCAGCTGGGAAATGGCTAAAGAATGTTTCACAACCAATGACAAGGCACTTGCCTCACGCCCCACAACCGTTGCCGCAAAGATTATGGGATACAACTACGCAGTGTTTGGTTTTGCCCCTTATAGTCCCTTTTGGCGTGAGATGAGAAAGATTGCAACTCTTGAACTTCTTTCCAACCGCAGGCTCGAAATGCTGAAGCATGTCAGAGTGTCGGAACTCGGCATGGGCATAAGGGATTTATACAACTCTTGGGTCCAGAACAGGTCTCGGCCTGTGCTTGTGGAACTGAGCCGATGGTTGGAGGATTTGACTCTGAACATGGTGGTTAGAATGGTGGCTGGGAAACGCTACTTCGGTGCCTCTGCAACGTGTGATGATGATGAAGCAAGGCGGTGCCAGAAGGCTATTAATCAGTTCTTTCATCTCATTGGGATTTTTGTGGTTTCAGATGCGCTCCCGTTTCTGCGTTGGTTTGATGTGCAGGGGCACGAGAGGGCAATGAAGAAAACTGCCATGGAGTTGGATGCCATACTTGAAGGGTGGCTACACGAGCATCGTATGCAAAGAGTTGATGGTGAAGTTAAACCAGAGGGCGAACTTGATTTCATAGATGTCATGTTGTCTCTTCAGAAGACTGGTCACCTATCAAATTTCCAATATGATTCCGACACCAGCATCAAATCCACATGTCTCGCTATTATACTTGGTGGCAGTGATACCTCAGCCGGAACACTTACTTGGGCCATCTCATTACTCCTGAACAATCGGCAAGCATTGAAAAAGGCCCAAGAAGAATTGGACCTGAATGTTGGCATGGGTAGGCAAGTTGAGGAGTCAGACATCAGAAACCTTGCATATCTTCAAGCCATTATCAAGGAAACCTTGCGGCTATACCCAGCTGGGCCTCTCCTAGGACCAAGGGAAGCCCAAGAAGATTGCAATGTGGGTGGTTATGATGTCCCTGCTGGAACACGGTTGGTGGTTAACCTGTGGAAGATTCATAGGGATCCAAGGGTGTGGGAAGAGCCTTCTGCTTTCAGACCAGAGAGGTTTCTGACAAGTGATGGTGTTGATGTTCGAGGCCAAAACTTTGAACTCATTCCCTTTGGGTCTGGTAGAAGGTCTTGTCCTGGCATGTCTTTTGCACTCCAAGTTCTTCACCTGACATTGGCTCGTCTGCTTCATGCATTTGAATTTGCAACTCCATCAGATGAACCAGTTGACATGACGGAGAGTCCTGGTTTAACAATTCCTAAGGCAACTCCCTTGGAGCTTCTTCTCTCTCCTCGCCTTCCACCCCAATTATATGCCTACTAA 1527 0.4787 MSAFLWHAFLGKKRNNSKEAPVPVGAWPLIGHLHLLGGHDQLLYRTLGTMADQYGPAFNIWLGSRRAFVVSSWEMAKECFTTNDKALASRPTTVAAKIMGYNYAVFGFAPYSPFWREMRKIATLELLSNRRLEMLKHVRVSELGMGIRDLYNSWVQNRSRPVLVELSRWLEDLTLNMVVRMVAGKRYFGASATCDDDEARRCQKAINQFFHLIGIFVVSDALPFLRWFDVQGHERAMKKTAMELDAILEGWLHEHRMQRVDGEVKPEGELDFIDVMLSLQKTGHLSNFQYDSDTSIKSTCLAIILGGSDTSAGTLTWAISLLLNNRQALKKAQEELDLNVGMGRQVEESDIRNLAYLQAIIKETLRLYPAGPLLGPREAQEDCNVGGYDVPAGTRLVVNLWKIHRDPRVWEEPSAFRPERFLTSDGVDVRGQNFELIPFGSGRRSCPGMSFALQVLHLTLARLLHAFEFATPSDEPVDMTESPGLTIPKATPLELLLSPRLPPQLYAY* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1544 508 Gene3D Cytochrome P450 7 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 Pfam Cytochrome P450 25 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PRINTS E-class P450 group I signature 51 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PRINTS E-class P450 group I signature 75 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 SUPERFAMILY Cytochrome P450 23 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1544 508 PANTHER STEROID 21-HYDROXYLASE-RELATED 14 503 - -
Vra5g1544 508 PANTHER CYTOCHROME P450 CYP82D47-LIKE 14 503 - -
Vra5g1544 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1544 Vra-Chr5 22047113 22048890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1544 20 507 Cytochrome P450 AT4G31940 69.636 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1544 K23136 - gmx:100811993 917.916