Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1534 ATGGATTTCAGCAGCACTAGAATGTTGGCACAAGGTGTATTTGTCTTCCTTATGCTTTCGACCATGGCAGAGGGGACAAAGCCCAGAACCATTTTGGTCGGAGACTCCCAAGGTTGGCGTGCAGGCACTAACTACACGCAATGGGCTATTGAAAATAGCCCCTTCCACATAAATGATACACTGGTTTTCAAGTATCCAGCACCAGGAAATTCGACGGTTACGCAGAGCGTGTACTTGCTCCCGAACTTGTGGAGCTACATAACGTGCGAATTCCGAGGAGCAAAGTTGTTGGGGAACGCAAGCGAAGGAGACGAGGAAGGTTTTAAGGTTGCACTGAAGGAGTCGAAGCCATATTACTTTGCCTCCGCAGAAGGCAACTCTTATGACTGTCTTGCTGGTCTCACCAAGTTCATCGCTGTTCCATCTTAA 429 0.4825 MDFSSTRMLAQGVFVFLMLSTMAEGTKPRTILVGDSQGWRAGTNYTQWAIENSPFHINDTLVFKYPAPGNSTVTQSVYLLPNLWSYITCEFRGAKLLGNASEGDEEGFKVALKESKPYYFASAEGNSYDCLAGLTKFIAVPS* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1534 142 Gene3D - 27 141 IPR008972 -
Vra5g1534 142 SUPERFAMILY Cupredoxins 29 140 IPR008972 -
Vra5g1534 142 Pfam Plastocyanin-like domain 39 125 IPR003245 GO:0009055
Vra5g1534 142 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 6 141 - -
Vra5g1534 142 ProSiteProfiles Phytocyanin domain profile. 29 142 IPR003245 GO:0009055
Vra5g1534 142 PANTHER GLYCINE-RICH PROTEIN-LIKE 6 141 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1534 14 126 Phytocyanin Superfamily AT4G30590 34.426 1.55e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1534 - - vra:106760467 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1534 5 21967573 21968160 Vra5g1534 5 21967573 21968160 ECH