Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1501 ATGAATTCCATTGTCGTAAGAAACGTTTCAGAATGTTTAATCAAGCCGTTTGGCCCAGCTCAAGAGTCCCACCGAATATGCAATTTAACATCTTGGGATATTGGTATGCTGTCTATGCATTACATCCAGAAGGGTCTACTATTCAAGAAACCTGCAACACTTGTTGATCGACAAGATTTCATAGAGAATCTGTTGGAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTTCCATTTTTATCCATTGGCAGGCCACCTTGTCACAAACAAAGACCCTTCCTTTTATACTATTTTCGTTGATTGCAACGACAGTCATGGAGCTAGATTCATTTATGCAACTTCGGATTTGACAATATTTGACATACTCTCCCCTGTTGACGTCCCGCCTGTTGTTCACTCATTCTTTGATCATCACAAAGCTGTCAACCATGATGGTCACACCATGCCTCTGTTGTCAGTTAAAGTCACCGAACTATTGGATGGTGTTTTCATAGGCTGTTCTATGAACCACGCCATAGGCGATGGAACTTCTTATTGGAATTTCTTTAATACATGGTCTGAGATCTTTCAAGCTCATGCTCAAGGCCATGAATACGGTGTTCCCATTTCACGCCACCCCATTCATAACCGGTGGTTTCCTTATGGTTGTGATCCATTAATCAATCTTCCCTTCAAACATCACGACGAGTTTATTAGCAGATTTGAAGCACCCCAGCTGAGAGAGAGAATCTTCCATTTTTCAGCAGAGTCAATTGCAAAACTGAAAGCAAGGGCTAACTCAGAGTCCAAGAACACCAAAATCTCTTCGTTCCAATCCTTATCAGCTCATGTATGGAGATGCATAACACGCGCTCGTCAGCTGCCACATGATGAGGTAACTAGCTGCAAATTGGCCATGAATAATCGAGTAAGAATGGAGCCGCCTCTGCCACATGAATACTTTGGAAACTGTATTAGTGTGGTGAGTGCGGGGACAACAGTAGGGGAACTCCTGGAGAATGATCTAGGATGGGCTGCATGGAAAGTGCACCTGGCCGTAGAAAACCAAAACGACGGAGCAGTGCGACACGCGGTGAAAGAGTGGTTACAACACCCTGTGGTGTACCAACTTGGTGTGCACTTTGATTCGTGTAGTGTGACGATGTCAAGTTCGCCCAGGTTTGAGGTATATGGGAATGAATTTGGGATGGGAAAAGCTGTTGCAGTTCTGAGCGGATATGCCAACAAATTTGATGGGAATGTGACTTCATATCCAGGATCCGAAGGAGGGGGNAGCATAGATTTGGAAGTGTCCCTTTCGCCCGAAGCAATGAGCTTACTTGAATCGGATGAGGAGTTTATGGATGTGGTTTCTGTGGCCAATTCCCTACACTAG 1374 0.4454 MNSIVVRNVSECLIKPFGPAQESHRICNLTSWDIGMLSMHYIQKGLLFKKPATLVDRQDFIENLLEKLKHSLSLTLFHFYPLAGHLVTNKDPSFYTIFVDCNDSHGARFIYATSDLTIFDILSPVDVPPVVHSFFDHHKAVNHDGHTMPLLSVKVTELLDGVFIGCSMNHAIGDGTSYWNFFNTWSEIFQAHAQGHEYGVPISRHPIHNRWFPYGCDPLINLPFKHHDEFISRFEAPQLRERIFHFSAESIAKLKARANSESKNTKISSFQSLSAHVWRCITRARQLPHDEVTSCKLAMNNRVRMEPPLPHEYFGNCISVVSAGTTVGELLENDLGWAAWKVHLAVENQNDGAVRHAVKEWLQHPVVYQLGVHFDSCSVTMSSSPRFEVYGNEFGMGKAVAVLSGYANKFDGNVTSYPGSEGGGSIDLEVSLSPEAMSLLESDEEFMDVVSVANSLH* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1501 457 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 450 - -
Vra5g1501 457 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 450 - -
Vra5g1501 457 Pfam Transferase family 10 447 - -
Vra5g1501 457 Gene3D - 228 442 IPR023213 -
Vra5g1501 457 Gene3D - 3 217 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1501 Vra-Chr5 21666345 21668625 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1501 19 441 Monolignol Biosynthesis Gene Families AT5G48930 27.434 3.59e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1501 - - gmx:100788297 754.207