Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1498 ATGGGTACTCCTGTCCTACGACGCATTTCGGAGTGTTTTGTGAAGCCTCACCGCTCCAACCACTTCTCCCATCAAATCTGTAATTTAACACCTTGGGATATTGCCATGTTGTCTGTGCACTATATTCAGAAGGGTCTACTCTTCAAGAAGCCTGCAATCCTGCTTCATCAAAACGATTTCATACAAAATCTGTTGGAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTCCCATTTCTATCCATTGTCCGGTCGCCTTGTCACTCACAAAACCCAAAACCCTCCCTCTTATATTGTTTCTGTTGATTGCAACAGCGGTGATGGAGCTAGATTCATTCATGCAACTCTGGATATCACTATAGCTGATATCCTCTCCCCCCTTGATGTCCCACCACTTGTTCAATCATTCTTTGACCACCACAAAGCAGTTAACCATGACGGTCACTCCATGCCGCTGCTGTCTATCCAAGTCACTGAACTTGTGGACGGTGTTTTCATAGGTTGTTCCATGAACCATGTTATTGGCGATGGAACTTCTTATTGGGATTTCTTCAATTCATGGTCTCAGATCTTTCAAGCACAATCTCAATCTGAAAACCTTGAATACGATGTTCCCATCTCACGCCAACCAATTCACAATCGTTGGTTTCCAAATAATTGTAGACCACCGATATCTCTTCCTTTCAAACATCATGACGAGTTTATAGAGAGATCTGAAAAACCCCTTCTCCTGAGAGAGAGATTTTTCCGCTTTTCAGCAGAGTCTATTGCGAAACTGAAAGCAAAGGCCAACTCAGAATCCAATACCACAACAATATCTTCCTTCCAGTCATTATCAGCACTTGTTTGGAGGTCCATAACTCGTGCGCGCTCCATACCGTCTGACCAAAAAACAACTTGCAGATTAGCCGCAAGCACTCGACCAAGAATGGAGCCGCCTCTGCCTGAAGAATACTTTGGAAACTGCCTTCATGCAGTGAGTGCAGAAACGACAACAGGGGAATTGGTTGAGAATGATCTAGGATGGGCGGCATGGAAGTTGCATGTGGCTGTTAAAAACCTCAACGATAGAGTGGTGTTGCAGTATCTCCGAGAGTGGTTAGATTCTCCTGTGATATATCAAATGGGTCGTTTCTTTGAACCATATTGTGTGATGATGGGTAGCTCCCCGAGGTTCAATATGTATGGGAGTGAATTTGGAATGGGGAAAGCGGTGGCTACTAGAAGTGGCTATGCAAATAAATTTGATGGGAAAGTGTCATCATACCCAGGCCGTGAAGGAGGAGGAAGCATTGATTTGGAAGTTTGCCTTTTCTCACATACAATGAGTGCCTTGGAATCAGACAAGGAATTCATGGATGCAGTTTCTGACTTCAACCCCCTGCTGTTCTAG 1392 0.4447 MGTPVLRRISECFVKPHRSNHFSHQICNLTPWDIAMLSVHYIQKGLLFKKPAILLHQNDFIQNLLEKLKHSLSLTLSHFYPLSGRLVTHKTQNPPSYIVSVDCNSGDGARFIHATLDITIADILSPLDVPPLVQSFFDHHKAVNHDGHSMPLLSIQVTELVDGVFIGCSMNHVIGDGTSYWDFFNSWSQIFQAQSQSENLEYDVPISRQPIHNRWFPNNCRPPISLPFKHHDEFIERSEKPLLLRERFFRFSAESIAKLKAKANSESNTTTISSFQSLSALVWRSITRARSIPSDQKTTCRLAASTRPRMEPPLPEEYFGNCLHAVSAETTTGELVENDLGWAAWKLHVAVKNLNDRVVLQYLREWLDSPVIYQMGRFFEPYCVMMGSSPRFNMYGSEFGMGKAVATRSGYANKFDGKVSSYPGREGGGSIDLEVCLFSHTMSALESDKEFMDAVSDFNPLLF* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1498 463 Gene3D - 8 225 IPR023213 -
Vra5g1498 463 Pfam Transferase family 19 452 - -
Vra5g1498 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 455 - -
Vra5g1498 463 Gene3D - 231 447 IPR023213 -
Vra5g1498 463 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1498 Vra-Chr5 21653958 21655778 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1498 48 446 Monolignol Biosynthesis Gene Families AT5G48930 26.794 1.86e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1498 - - vra:106761257 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1498 5 21653958 21655778 Vra5g1498 5 21653958 21655778 ECH