Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1487 ATGGAAAGTGGATTACCTTTGCTTAACTGTCTCTTGCAGCAGACTCTCAGAACCATTTGCACTTCTTCCAATTCTTCCACTTCTTCTAAGTGGGTTTATGCTGTCTTCTGGAGGATACTGCCTCGAAACTTTCCTCCACCAAGGTGGGAATTTGGAGGAACTGCGCTTGATCTCTCCAAAGGAAATAAAAGGAACTGGATTCTTGTCTGGGAAGATGGGTTCTGCGATTTTAACGAATGCGAACAGAGGAAGACTGGTAGTGGTTACTTGAACGGTAGATTTGGAGCTGACGTATTCTTCAAAATGTCGCATGAAGTTTACAATTATGGAGAGGGACTAGTGGGAAAAGTTGCCGCAGATAATGGTCACAAATGGGTTTACAACGAGAGTCACAACAGCGAGTGTGAAGCTAGTTATATTGCTACATGGAACACTTCGGTAGAGCCTCAACCAAAGGCATGGGAGTCTCAGTTCAATTCAGGCATCCAGAGTATAGTCATAATAGCAGTCAGAGAAGGCGTTGTGCAATTGGGTTCTTTTAACAAGATTGCAGAGGACCTGAATCTGGTGATCAGCATACAAAGACAATTCAGCTACCTCCAAAGCATACCGGGTGTGTTTGGTATTCAAAGATCATACCTACCGATTCAACATCCATACATTGTGAAGCCCAGTTTCATAGAAAGCAATGGAATGCCTCCATATGACATGGCCTGGAACAACAACCCTCAAATTGGAGCACCGGGCCCATCTCTTTGTTCAGGTTCTCCACCTTTACAATTACCATTACCATTACCATTACCATTACCAACCATGCCTTGCAGTTTTGGAGCTTTGCTATCGAAGTTACCATCTGGAATCCCACTGCATAATCAAGTCCCTAATTCTGGGACACAGAGCAGCACCATGGAGAGAGTGAAGATTGAGGACTGCGAATTTTATCCTACCCATGACGGTGATCACAAGGGAAAGGTTCCTTCCTTGAACGAGTAG 993 0.4431 MESGLPLLNCLLQQTLRTICTSSNSSTSSKWVYAVFWRILPRNFPPPRWEFGGTALDLSKGNKRNWILVWEDGFCDFNECEQRKTGSGYLNGRFGADVFFKMSHEVYNYGEGLVGKVAADNGHKWVYNESHNSECEASYIATWNTSVEPQPKAWESQFNSGIQSIVIIAVREGVVQLGSFNKIAEDLNLVISIQRQFSYLQSIPGVFGIQRSYLPIQHPYIVKPSFIESNGMPPYDMAWNNNPQIGAPGPSLCSGSPPLQLPLPLPLPLPTMPCSFGALLSKLPSGIPLHNQVPNSGTQSSTMERVKIEDCEFYPTHDGDHKGKVPSLNE* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1487 330 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 303 - -
Vra5g1487 330 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 197 IPR025610 -
Vra5g1487 330 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1487 Vra-Chr5 21537883 21539920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1487 13 201 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.579 4.52e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1487 - - gmx:100793250 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1487 5 21537883 21539920 Vra5g1487 5 21537883 21539920 ECH