Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1462 ATGGTTATCACAACCTTCAACGGAGCTGGCGTTGGATTTGGTTTCGGCGTAGGTTGCGGTTTCGGTATAGGATGGGGTTTCGGAGGTATGCCATTGAACTTATTGGGTCTTGGTGCAGGTGGAGGTTGTGGCGTTGGAGTAGGACTTGGTTGGGGGTTTGGTACTGCCTTTGGTAGCAAATATAGGTCCTCACGGGTCACATTTCAAGGAGTGGAATTTGATAGCAAGGAGACAGTTAACAGCAAGGAGTTCTCAAAGCCCAGTACAGAAGTTGCTCAGCACAGATCCAACAAAGACTGTTGGGTGGTGATCAATGGAAGAGTTTTGGATGTGACAAGGTTTTTGGAGGAACACCCGGGAGGGGAAGAGGTGATTCTAGAAGTGGCTGGGAAGGAGGCGACGAAGCAATTTGATGCCATTGGACACAGCAAAGCAGCACAAAACATGGTACTAAAGTACCAGGTTGGTGTTCTCGAAGGTGCCAAGGTTGAAGAGGTAGACATGAACGATGATGTTGTTGAGATGGAATCCAACAGCAAAGAGATGAGTGCCTTCGTCATCAAAGATGATGGAAACTATAAGTCAACCTCATTTTACGAGTTCTTTGTTCCTCTTGTTGTTGCTGCTCTCTACTTTGGCTATCGATGCCTCACCGTCCCTCAATACTAG 669 0.4723 MVITTFNGAGVGFGFGVGCGFGIGWGFGGMPLNLLGLGAGGGCGVGVGLGWGFGTAFGSKYRSSRVTFQGVEFDSKETVNSKEFSKPSTEVAQHRSNKDCWVVINGRVLDVTRFLEEHPGGEEVILEVAGKEATKQFDAIGHSKAAQNMVLKYQVGVLEGAKVEEVDMNDDVVEMESNSKEMSAFVIKDDGNYKSTSFYEFFVPLVVAALYFGYRCLTVPQY* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1462 222 SMART Cyt_b5_2 86 159 IPR001199 -
Vra5g1462 222 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 89 163 IPR036400 -
Vra5g1462 222 PANTHER CYTOCHROME B5 89 219 - -
Vra5g1462 222 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 90 159 IPR001199 -
Vra5g1462 222 PANTHER CYTOCHROME B5-LIKE 89 219 - -
Vra5g1462 222 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 114 121 IPR018506 GO:0020037
Vra5g1462 222 Pfam Cytochrome b5-like Heme/Steroid binding domain 89 158 IPR001199 -
Vra5g1462 222 Gene3D - 79 164 IPR036400 -
Vra5g1462 222 PRINTS Cytochrome B5 signature 108 118 IPR001199 -
Vra5g1462 222 PRINTS Cytochrome B5 signature 118 132 IPR001199 -
Vra5g1462 222 PRINTS Cytochrome B5 signature 133 140 IPR001199 -
Vra5g1462 222 PRINTS Cytochrome B5 signature 146 158 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1462 Vra-Chr5 21312977 21318847 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1462 89 218 NADPH P450 reductases AT5G48810 41.667 2.17e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1462 - - gmx:100797990 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1462 5 21312977 21318847 Vra5g1462 5 21312977 21318847 ECH