Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1456 ATGCGGGTTGCGAATTGCTCCATTTCGTGGTCGTTTGGGTCAGCCGTCACTGCCGCTTTCCCCTCTTTCCCTTCTTCTAGATTCCCTCCGCTCCTCCCTTTCTCACTCCCTTCTTCCAACCCTCCGTCCACCGTCCTCCGCCGTTCCACTTCTTCCGCTAGACGAGTGACCGGAATGGCTCTGAAAAACGCTAAAGATGAACAAGACCCGCGCTTGGAGAGAATCTCCTCTGCAATCCGAGTCATCCCTGATTTTCCCAAGCCAGGAATTTTGTTTCAGGACATAACCACGCTGCTTCTTGATCCCAAGGCTTTCAAAGACACCATCGATCTTTTTGTTGAGAGGTACAGAGATCAAAATATCAATGTTGTCGCAGGTGTTGAAGCAAGAGGCTTTATATTTGGTCCACCCATTGCATTAGCTATTGGAGCAAAATTTGTCCCCATGAGGAAACCCAATAAATTGCCAGGGGAGGTTATATCAGAAGAGTATTCTTTGGAGTATGGAAAAGACAAAATGGAGATGCATGTAGGGGCTGTACAACCTGGAGAACGGGCCTTAGTCATAGATGATCTTATTGCCACTGGGGGAACGTTAGATGCTGCAATTAAGCTACTAGAACGTGTTGGGGTTCATGTTGTGGAGTGTGCTTGTCTGATTGAATTACCAGAGCTGAAGGGGCGAGATAGGCTGGGAAACAAGCCGCTATTTGTCTTAGTGAAAGTATGA 729 0.476 MRVANCSISWSFGSAVTAAFPSFPSSRFPPLLPFSLPSSNPPSTVLRRSTSSARRVTGMALKNAKDEQDPRLERISSAIRVIPDFPKPGILFQDITTLLLDPKAFKDTIDLFVERYRDQNINVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGKDKMEMHVGAVQPGERALVIDDLIATGGTLDAAIKLLERVGVHVVECACLIELPELKGRDRLGNKPLFVLVKV* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1456 242 PANTHER ADENINE PHOSPHORIBOSYL TRANSFERASE, PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN-RELATED 68 240 - -
Vra5g1456 242 CDD PRTases_typeI 109 241 IPR000836 -
Vra5g1456 242 TIGRFAM apt: adenine phosphoribosyltransferase 76 241 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vra5g1456 242 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 68 240 - -
Vra5g1456 242 Hamap Adenine phosphoribosyltransferase [apt]. 75 242 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vra5g1456 242 Gene3D - 62 242 IPR029057 -
Vra5g1456 242 Pfam Phosphoribosyl transferase domain 102 230 IPR000836 -
Vra5g1456 242 SUPERFAMILY PRTase-like 77 236 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1456 Vra-Chr5 21267245 21273411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1456 65 241 PRT Gene Family AT1G27450 80.226 6.97e-105 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1456 K00759 - gmx:100777103 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1456 5 21267245 21273411 Vra5g1456 5 21267245 21273411 ECH