Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1450 ATGGATGATCTTTCGTCCAGCCTTCTGTGCCAAGAAAACGATACGTGTTTGGAAGAAGGAGGTGATGAATTAGAATACCAATTGGTTGGATCACGGCATGATTGTGGGGTTTCGGAGGATGAGTATGTGGGGATTTTGGTTGAGAGAGAGATCGTTCTTGGGTTCAGAAGGGACGAAAGTTTGGTGTTTGGGGACTGGATGAAGCGTGCACGCTTGGAGGCAATCAATTGGATTCTCAAAACAAGAGCAACATTGGGTTTTCGCTTCGAAACGGCTTATTTGTCAGTCACATACTTCGATCGATTTCTTTCTAGACGGTCCATTGATAGTGAAAAGTGGTGGGCAATTCGGTTGCTTTCAATTGCATGTCTCTCTTTGGCTGCAAAGATGGAGGAGTGCAATGTGCCAGAGCTAACAGAGTTCAAATTGGAAGACTATTCCTTTGAGGGAAAAGTGATTCAGAAAATGGAGCTCTTGGTGCTCAGCACATTGGAGTGGGAAATGGGTATCATCACTCCCTTTGATTTTCTTTCCTATTTCATCACAAAGTTCTGTAAAGAATCTCCACCAAGTCCTACTTTTTCCAAGGCCATGCAACTCATCTTTACCACTATGAAAGAGGTCAATTTAATGGATCAAAAACCATCAGTCATTGCAGCGGCTGCTACATTAGTGGCAATGGATCAAAAAATGACGATGGAGGCGGTGGAGTTGAAGATGAGTTCAATTCCTCAACATAGGCTTCTAGAACCTAAAGATGTATTGGAGTACTACAATCTAATTCAAAGATTACAGGAGGAGGAGGAGACCAAAAGGGACACGCACACGCCAATCGACGTGACTGACAGCTCCAGAGTTACTTCTTCAGCAGCAATGGCAAAGAGAAGAAGACTCACATTCAGTGATGAAGGAAGTAGTCATGGGAAGGGACAGGGCTAG 939 0.4398 MDDLSSSLLCQENDTCLEEGGDELEYQLVGSRHDCGVSEDEYVGILVEREIVLGFRRDESLVFGDWMKRARLEAINWILKTRATLGFRFETAYLSVTYFDRFLSRRSIDSEKWWAIRLLSIACLSLAAKMEECNVPELTEFKLEDYSFEGKVIQKMELLVLSTLEWEMGIITPFDFLSYFITKFCKESPPSPTFSKAMQLIFTTMKEVNLMDQKPSVIAAAATLVAMDQKMTMEAVELKMSSIPQHRLLEPKDVLEYYNLIQRLQEEEETKRDTHTPIDVTDSSRVTSSAAMAKRRRLTFSDEGSSHGKGQG* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1450 312 SMART cyclin_7 175 263 IPR013763 -
Vra5g1450 312 SMART cyclin_7 76 162 IPR013763 -
Vra5g1450 312 Pfam Cyclin, N-terminal domain 69 168 IPR006671 -
Vra5g1450 312 PANTHER CYCLINS 42 279 IPR039361 -
Vra5g1450 312 Pfam Cyclin, C-terminal domain 171 271 IPR004367 -
Vra5g1450 312 SMART Cyclin_C_2 171 298 IPR004367 -
Vra5g1450 312 Gene3D - 64 163 - -
Vra5g1450 312 MobiDBLite consensus disorder prediction 268 312 - -
Vra5g1450 312 Gene3D - 164 279 - -
Vra5g1450 312 PANTHER CYCLIN-D5-1 42 279 - -
Vra5g1450 312 CDD CYCLIN 71 161 IPR013763 -
Vra5g1450 312 ProSitePatterns Cyclins signature. 71 102 IPR006671 -
Vra5g1450 312 SUPERFAMILY Cyclin-like 34 168 IPR036915 -
Vra5g1450 312 SUPERFAMILY Cyclin-like 154 243 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1450 Vra-Chr5 21203343 21205646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1450 8 243 Core Cell Cycle Gene Families AT4G37630 38.095 2.33e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1450 K18811 - gmx:100798728 540.036