Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra5g1360 | ATGAATCTAAGTGAGAGCCTAACTACCCGCAGCAACCTTTCTCGCCAATCATCCAAGTCCAAGAGTGGTGGATGTTGTCGAGGCCTCAGCAGCGTTAGGACCGTCTCATCCACCGCACCAACCTTGCAACACCATCACCTTCAGCAGCTTTACCAAAAATTGGAACTAAAGGTCGCAGGTTTGGAAAAAGAGGTGCAGAGGCAGACAGAACTGCGCGTTATGTACAGGAAAAGAATGGAAAAGACGCAGGATTACTTGAAATACTGTCTCCAAATCGCACAGGAAAATGGAATCTTGGACCTCATTACCCACTCCAACGGTGAAGTCTCGCAATCTTCCCTTTCTTCTTCACATGAACCCACAGCTTCGCACAACCATCCCAATCTGATACCCATCGTTCATCAAGCCAAAATCAATGGATGGTTCATCAACCCCAGTGAGATTCGTCTGGGAGAAAAAATAGGGCAGGGAACCACGGCGGAGATTCACAGAGGGACGTGGCGCGGGTTTGATGTGGCGGTGAAGTGCATGTCAGATTCATTCTTCAGCAAAAACGAAAACGGTGTCGTATTCTTCGCTCAGGAGGTTGAAACCCTCTCGAAACAGCGTCACCGGTTTGTGCTTCACCTCATGGGTGCGTGTCTCGACCCTCCGCATCATGCATGGGTGGTTACCGAGTATCTGAACACCACGCTCAAGGACTGGCTACATGGGCCGGGGAAAAGGCCCAAAAACAGAACAACGCCGCTCCCTCCCTTCAAAGAGAGGGTGATGCGGGCCCTGGAAATAGCCCAAGCCATGCAGTACCTCCACGAACAAAAGCCCAAGGTCATTCATCGTGACTTGAAGCCCAGCAACATCTTCCTGGACGATGCGTTGCATGTGAGAGTGGCGGATTTTGGTCACGCGCGGTTCTTGGACGACGACGAAATGGCCCTCACCGGAGAAACAGGAACATACGTGTATATGGCACCGGAGGTAATCCGGTGCGAGCCCTACGATGAAAAATGCGATGTATACAGTTTTGGGATCATACTCAACGAATTACTTACTGGAAACTACCCTTATATTGAGACACAACTTGGTCCCGCCAAGATTGCTATGGAAGTTGTGGAGGATGAGCTAAGGCCTTTAATTGCATCAAAGGACGATGGTGAGGAAGTGGAAGAATTGATTGAGCTAATATGCCTTTGCTGGAATGCAAGCCCATCCACTCGACCATCATTCGCAACAATTACTCATACCCTCAACTCTTATGTTAAAAGGGTCCTTCTAATTTCAAATTAA | 1287 | 0.4903 | MNLSESLTTRSNLSRQSSKSKSGGCCRGLSSVRTVSSTAPTLQHHHLQQLYQKLELKVAGLEKEVQRQTELRVMYRKRMEKTQDYLKYCLQIAQENGILDLITHSNGEVSQSSLSSSHEPTASHNHPNLIPIVHQAKINGWFINPSEIRLGEKIGQGTTAEIHRGTWRGFDVAVKCMSDSFFSKNENGVVFFAQEVETLSKQRHRFVLHLMGACLDPPHHAWVVTEYLNTTLKDWLHGPGKRPKNRTTPLPPFKERVMRALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDALHVRVADFGHARFLDDDEMALTGETGTYVYMAPEVIRCEPYDEKCDVYSFGIILNELLTGNYPYIETQLGPAKIAMEVVEDELRPLIASKDDGEEVEELIELICLCWNASPSTRPSFATITHTLNSYVKRVLLISN* | 429 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra5g1360 | 428 | Coils | Coil | 44 | 71 | - | - | |
Vra5g1360 | 428 | Pfam | Protein kinase domain | 150 | 414 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g1360 | 428 | CDD | STKc_MAP3K-like | 154 | 416 | - | - | |
Vra5g1360 | 428 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 277 | 289 | IPR008271 | GO:0004672|GO:0006468 | |
Vra5g1360 | 428 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Vra5g1360 | 428 | ProSiteProfiles | Protein kinase domain profile. | 148 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g1360 | 428 | Gene3D | Transferase(Phosphotransferase) domain 1 | 229 | 424 | - | - | |
Vra5g1360 | 428 | SMART | serkin_6 | 148 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g1360 | 428 | PANTHER | OS09G0443600 PROTEIN | 14 | 423 | - | - | |
Vra5g1360 | 428 | SUPERFAMILY | Protein kinase-like (PK-like) | 114 | 415 | IPR011009 | - | |
Vra5g1360 | 428 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 14 | 423 | - | - | |
Vra5g1360 | 428 | ProSitePatterns | Protein kinases ATP-binding region signature. | 154 | 175 | IPR017441 | GO:0005524 | |
Vra5g1360 | 428 | Gene3D | Phosphorylase Kinase; domain 1 | 136 | 228 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra5g1360 | Vra-Chr5 | 20415620 | 20417582 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra5g1360 | 129 | 423 | MAP Kinase Kinase Kinase | AT4G35780 | 35.452 | 2.84e-48 | 171 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-8 | Vra5g1360 | Pkinase | 3.6e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra5g1360 | - | - | gmx:100810435 | 676.396 |