Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1356 ATGCAGCCTCACAGTCCCTACCAAATGGCCAACACCTATCACACTTCTTCCTCATCGACTCTAAGCCCTAATCACACTCCTCACCAATTTCATCATCTTCAACACTGCGACTATCCTCACAGTCACCACAACCAACATTCTCACCAATTCTTCCAACAACAACCTCAACATCTGGGAATGCTCGATTCTTCTCTCCACCCCCAAGAACAATCCACAACCACTGCGTCCTTTTGGAAAGCATTCAACACGGTACTCTCTGATGCAAAGGGGAAGCACCAAGAGGTGAATGAGAACATCGGGGATCTTGAAGATGTGTACAAAAAGGGTCGTAACGAAGACGCATCACGTGCAGTGATGAATGAGTGGGAAATGTTAGCGACGGAAACAGTTGAGGTGGAGGGCGGAGGCGCGAGGAGGAGTGGGAAAAGGAGGAGAAAGAAGAGAGAAGAAGAAAAAATGGTTTCGTTTTTCAAGAGGTTGGTGAAGCGTGTGGTTAAGCAGCAGGAGGTTCTGCAGAACAAATTGGTGGCGACGATTGAGCGAATGGAGAAAGAAAGAGCGGAATGGGAAGAGGGTTGGAGGCGTCGAGAAGCGGAAATTCACGATAGAGAAGCGCTTATGAAAGCACGAGAGCGAGATCTGGCTTCTAAGAGAGACTCTTCCATTGTCTCCAGCTTAGAGAAAATAACCGGTCAAAGGTTCGTTCTTGTTTCTGGGAAAGGTCACGACCAATTATCTACCATACATGAAAATTAA 756 0.4709 MQPHSPYQMANTYHTSSSSTLSPNHTPHQFHHLQHCDYPHSHHNQHSHQFFQQQPQHLGMLDSSLHPQEQSTTTASFWKAFNTVLSDAKGKHQEVNENIGDLEDVYKKGRNEDASRAVMNEWEMLATETVEVEGGGARRSGKRRRKKREEEKMVSFFKRLVKRVVKQQEVLQNKLVATIERMEKERAEWEEGWRRREAEIHDREALMKARERDLASKRDSSIVSSLEKITGQRFVLVSGKGHDQLSTIHEN* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1356 251 Coils Coil 165 192 - -
Vra5g1356 251 PANTHER - 123 237 - -
Vra5g1356 251 MobiDBLite consensus disorder prediction 1 47 - -
Vra5g1356 251 Coils Coil 85 112 - -
Vra5g1356 251 MobiDBLite consensus disorder prediction 30 44 - -
Vra5g1356 251 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 123 237 - -
Vra5g1356 251 MobiDBLite consensus disorder prediction 1 29 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1356 143 235 Trihelix Transcription Factor Family AT5G03680 34.409 1.47e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1356 - - var:108331251 429.869