Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1353 ATGGAAGATAGCATGTTGAAAACTATGGCATGGTGCTTTGCCTTGCTAATTTTCTATGTCTTGATTAGCTTTGTGAACACTATGTGGTGGAGACCCAGAAAAATTGAGAAATTGTTGAGGAAGCAAGGGATTAGAGGAACTTCATACAGGTTTTTTACTGGTGACACTTTAGACATGAAAGACTGTACCCAAAAGGCATTATCAAAAACTATCTCCCTTGACCATCAGATCATCCCTCGAGTCCTCCCTTTTATGCACCAAATCGTTCAGCAACATGGAAAAATTTCACTGTGTTGGTTTGGAAGAAGACCAAGACTCATAATAGCAGATGCAGAGCTCACACGATTGATTTTAACAAACACGAAAGGGCACTTTGTGAAGCCACCACGTAACCCTCTCATCAATCTTCTATCGCGAGGATTGTCTTCGTTAGAAGGCGAAAGTTGGAGCAAACGCAGAAGGTTGGTAGCATCAGCTTTCCACCTTGAGAAATTGAAGGCAATGATGCCAGCATTTTCAATCAGCTGTAACAACATGATCGAGCGATGGGAGAAATTAGTAGAAGCTAGTGGATGGTATGAATTGAATGTTTGTTCAGAATTAGAAATTCTTACTGCTGATGTGATAGCTCGAACAGCCTTTGGAAGTAACTATCAAGAGGGAAAGAAAATTTTTGAACTGCAAAAGAAGCAAGCAGTCTTGGTCAATGAAGCCCTGAACAACATCTATATCCCAGGTTACAGATTTTTATCAACCACAAAGAACAAGCGCAGGTACAACCTAGATATCCAAATCAAAGCTATGTTAATAGATATGATACAGAAGAGAGAGCAGGCAATGAAAGAGAATAAAGTGAAAGAGCATGATTTGTTAAGTTCACTGCTACAGTATAAGGAAGAAAGTGATTCTTTCACAACAGATGATGTGATTGAAGAATGCAAGTTGTTTTACTTTGCCGGCCAAGTGACCACGGCCAACTTGCTTGTATGGACTATGATTGTTTTATCTATGCATCAAAATTGGCAAGAGAAGGCAAGAACAGAGGTGCTGAAGATTTTTGGCAAAAAAACACTTGACTATGAAGACATTAATCACCTCAAGATTGTGTCAATGATACTGTATGAAGTTTTGAGATTATACCCTCCTCTAGTAAACATTAACAAATACAGTTGGTGCGAAACAAGAGTGGGAGACATGTCGATTCCAGCAGGGGTTGAACTGTGTTTACCTTTGTTATTTCTTCATTATGACAGTAAGTATTGGGATAAGCCTGAAGAATTCAACCCAGGTAGATTCAGTGAAGGGATTTCAAAAGCTTCAAAGGATCATATCGCTTTCTATCCATTTGGTGGGGGCTCAAGAATCTGTCCTGGCCAAAACTTTGCCTTCTTAGAAGCAAAAATGGCTATGGCTTTCATTCTTCAACACTTCTCTTTCCAACTCTCACCCACTTATGCTCATGCTCCGGCAACTCCTACTATTACTCTCACGCCACAGCATGGTGCTCCCATTATTATTCGTCGCACTTAG 1530 0.4007 MEDSMLKTMAWCFALLIFYVLISFVNTMWWRPRKIEKLLRKQGIRGTSYRFFTGDTLDMKDCTQKALSKTISLDHQIIPRVLPFMHQIVQQHGKISLCWFGRRPRLIIADAELTRLILTNTKGHFVKPPRNPLINLLSRGLSSLEGESWSKRRRLVASAFHLEKLKAMMPAFSISCNNMIERWEKLVEASGWYELNVCSELEILTADVIARTAFGSNYQEGKKIFELQKKQAVLVNEALNNIYIPGYRFLSTTKNKRRYNLDIQIKAMLIDMIQKREQAMKENKVKEHDLLSSLLQYKEESDSFTTDDVIEECKLFYFAGQVTTANLLVWTMIVLSMHQNWQEKARTEVLKIFGKKTLDYEDINHLKIVSMILYEVLRLYPPLVNINKYSWCETRVGDMSIPAGVELCLPLLFLHYDSKYWDKPEEFNPGRFSEGISKASKDHIAFYPFGGGSRICPGQNFAFLEAKMAMAFILQHFSFQLSPTYAHAPATPTITLTPQHGAPIIIRRT* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1353 509 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 507 - -
Vra5g1353 509 Pfam Cytochrome P450 84 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 SUPERFAMILY Cytochrome P450 77 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 Gene3D Cytochrome P450 29 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g1353 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Vra5g1353 509 PANTHER CYTOCHROME P450 72A15-LIKE 1 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1353 Vra-Chr5 20380378 20383073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1353 25 505 Cytochrome P450 AT3G14620 46.598 5.69e-155 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1353 - - aip:107623710 661.759